RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
APOB-201ENST00000233242 BAG3O95817 575 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 MAP3K21Q5TCX8 1036 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 CEP85Q6P2H3 762 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 UBL4BQ8N7F7 174 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 ATP6V0A2Q9Y487 856 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 HIP1RO75146 1068 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 HMGB1P1B2RPK0 211 aaPredicted RBP9.22□□□□□ -0.93
APOB-201ENST00000233242 SECISBP2LQ93073 1101 aaKnown RBP9.22□□□□□ -0.93
APOB-201ENST00000233242 TSHZ3Q63HK5 1081 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 CEP120Q8N960 986 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 EFCAB13Q8IY85 973 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 DHX58Q96C10 678 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
APOB-201ENST00000233242 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 MSANTD4Q8NCY6 345 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
APOB-201ENST00000233242 MAP3K2Q9Y2U5 619 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 NLRP12P59046 1061 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 PLCD1P51178 756 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 CUTAO60888 179 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 TLDC2A0PJX2 215 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
APOB-201ENST00000233242 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 GKAP1Q5VSY0 366 aaPredicted RBP9.21□□□□□ -0.93
APOB-201ENST00000233242 CFAP157Q5JU67 520 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 ARMC9Q7Z3E5 817 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 VEZTQ9HBM0 779 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 SMARCC2Q8TAQ2 1214 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 SYNCQ9H7C4 482 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 ZRANB1Q9UGI0 708 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 BRD1O95696 1058 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 KRT2P35908 639 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 HAND2P61296 217 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 ANO1Q5XXA6 986 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 SYNRGQ9UMZ2 1314 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 ZMYM4Q5VZL5 1548 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 VGLL3A8MV65 326 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 RLBP1P12271 317 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.93
APOB-201ENST00000233242 RABGAP1Q9Y3P9 1069 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 CUL7Q14999 1698 aa9.21□□□□□ -0.93
APOB-201ENST00000233242 GMNNO75496 209 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 ETF1P62495 437 aaKnown RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 WDR78Q5VTH9 848 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 CRNKL1Q9BZJ0 848 aaKnown RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 CAPN7Q9Y6W3 813 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 SNCBQ16143 134 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 THEMISQ8N1K5 641 aaPredicted RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 TBC1D31Q96DN5 1066 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 MEIS3Q99687 375 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 VCX3AQ9NNX9 186 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 PI4KAP2A4QPH2 592 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 SEC24BO95487 1268 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 TRPC3Q13507 836 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 RPAINQ86UA6 219 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 VSIG1Q86XK7 387 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 PI4KAP1Q8N8J0 262 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 KCNH3Q9ULD8 1083 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 FAN1Q9Y2M0 1017 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 ZBTB17Q13105 803 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 CAPS2Q9BXY5 557 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 IFIT1BQ5T764 474 aaKnown RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 EXOC4Q96A65 974 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 IL15P40933 162 aaPredicted RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 NAP1L4Q99733 375 aaKnown RBP9.21□□□□□ -0.94
APOB-201ENST00000233242 WWC3Q9ULE0 1092 aa9.21□□□□□ -0.94
APOB-201ENST00000233242 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 HS2ST1Q7LGA3 356 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 CDC25BP30305 580 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 PARP2Q9UGN5 583 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 CRACR2BQ8N4Y2 399 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 KIF14Q15058 1648 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 GSTO1P78417 241 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 COMMD10Q9Y6G5 202 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 TBC1D8BQ0IIM8 1120 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 KRT79Q5XKE5 535 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 SAR1BQ9Y6B6 198 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 GNA11P29992 359 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 EVI5O60447 810 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 NUF2Q9BZD4 464 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 TOM1L2Q6ZVM7 507 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 CDC5LQ99459 802 aaKnown RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 I3L4J1 428 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 RNF40O75150 1001 aa9.2□□□□□ -0.94
APOB-201ENST00000233242 SPINK5Q9NQ38 1064 aaPredicted RBP9.2□□□□□ -0.94
APOB-201ENST00000233242 SMIM23A6NLE4 172 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms