RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 PPP2R2CQ9Y2T4 447 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 CCDC151A5D8V7 595 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 BECN2A8MW95 431 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 TNNT3P45378 269 aaPredicted RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 NCAPD2Q15021 1401 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 CEP57L1Q8IYX8 460 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 ZNF330Q9Y3S2 320 aaPredicted RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 ZNF16P17020 682 aaPredicted RBP9.12□□□□□ -0.95
SCG3-201ENST00000220478 ERCC3P19447 782 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 TXLNAP40222 546 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 MTX1Q13505 466 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 TTC31Q49AM3 519 aaPredicted RBP9.12□□□□□ -0.95
SCG3-201ENST00000220478 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 STOX1Q6ZVD7 989 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 CLIC6Q96NY7 704 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 PLEKHA4Q9H4M7 779 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 ARFGAP3Q9NP61 516 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 FANCCQ00597 558 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.12□□□□□ -0.95
SCG3-201ENST00000220478 MSANTD4Q8NCY6 345 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 PMM1Q92871 262 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
SCG3-201ENST00000220478 MYH8P13535 1937 aa9.12□□□□□ -0.95
SCG3-201ENST00000220478 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 SH3BP5O60239 455 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 PRPF6O94906 941 aaKnown RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 E2F4Q16254 413 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 BLOC1S2Q6QNY1 142 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 COG3Q96JB2 828 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 MRPL44Q9H9J2 332 aaKnown RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 VPS18Q9P253 973 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 TAF5LO75529 589 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 SMC2O95347 1197 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 TPM1P09493 284 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 CCDC30Q5VVM6 783 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 FSIP1Q8NA03 581 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 ECHDC1Q9NTX5 307 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 CWC15Q9P013 229 aaKnown RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 CFAP45Q9UL16 551 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 DIP2AQ14689 1571 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 ALDH1L1O75891 902 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 SASH1O94885 1247 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 GPS2Q13227 327 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 NAA16Q6N069 864 aaPredicted RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 FCHSD1Q86WN1 690 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 KAZALD1Q96I82 304 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 HDAC5Q9UQL6 1122 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 PIK3C2AO00443 1686 aa9.11□□□□□ -0.95
SCG3-201ENST00000220478 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
SCG3-201ENST00000220478 LRRIQ3A6PVS8 624 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 KIF4AO95239 1232 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 SYF2O95926 243 aaKnown RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 FDPSP14324 419 aaKnown RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 ANKRD1Q15327 319 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 NAALADL2Q58DX5 795 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 TC2NQ8N9U0 490 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 UBA5Q9GZZ9 404 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 GABBR1Q9UBS5 961 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 PA2G4Q9UQ80 394 aaKnown RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 ZNF609O15014 1411 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 BMP6P22004 513 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 LMOD1P29536 600 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 RUFY2Q8WXA3 655 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 ABCB6Q9NP58 842 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 A0A0G2JLW4 131 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 IKBKBO14920 756 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 CUTAO60888 179 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 PSMA5P28066 241 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 CDC27P30260 824 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 NLRP12P59046 1061 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 BRD3Q15059 726 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 Q6ZUG5 572 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 EAF2Q96CJ1 260 aaPredicted RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 AGXT2Q9BYV1 514 aa9.1□□□□□ -0.95
SCG3-201ENST00000220478 BICC1Q9H694 974 aaKnown RBP9.1□□□□□ -0.95
SCG3-201ENST00000220478 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
SCG3-201ENST00000220478 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 PFKFB2O60825 505 aa9.09□□□□□ -0.95
SCG3-201ENST00000220478 IVLP07476 585 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms