RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 PDE1AP54750 535 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 GNA11P29992 359 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 NAP1L4Q99733 375 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 MYCLP12524 364 aaPredicted RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 KRT83P78385 493 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 CCDC6Q16204 474 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 ARHGEF10LQ9HCE6 1279 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
KNOP1-201ENST00000219837 ZNF174Q15697 407 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 F13A1P00488 732 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 GABPAQ06546 454 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 STRN3Q13033 797 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 PRKG1Q13976 671 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 KMT5BQ4FZB7 885 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CFAP157Q5JU67 520 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
KNOP1-201ENST00000219837 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 SPTLC2O15270 562 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
KNOP1-201ENST00000219837 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 ZBTB9Q96C00 473 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 SV2BQ7L1I2 683 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CCT6BQ92526 530 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 UAP1Q16222 522 aaPredicted RBP12.5□□□□□ -0.41
KNOP1-201ENST00000219837 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 PPP1R21Q6ZMI0 780 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 KIFAP3Q92845 792 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
KNOP1-201ENST00000219837 SYCP2Q9BX26 1530 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
KNOP1-201ENST00000219837 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
KNOP1-201ENST00000219837 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 CALUO43852 315 aaPredicted RBP12.49□□□□□ -0.41
KNOP1-201ENST00000219837 MBD4O95243 580 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 BIRC3Q13489 604 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 GPATCH11Q8N954 259 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 GOLGA1Q92805 767 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 HAUS7Q99871 368 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 KCNK9Q9NPC2 374 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 E7EVH7 732 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 OPA1O60313 960 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 CCNL1Q9UK58 526 aaPredicted RBP12.49□□□□□ -0.41
KNOP1-201ENST00000219837 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
KNOP1-201ENST00000219837 RFX1P22670 979 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 HSPA4P34932 840 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
KNOP1-201ENST00000219837 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
KNOP1-201ENST00000219837 SPAG1Q07617 926 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 DAPK3O43293 454 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 ZBTB16Q05516 673 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
KNOP1-201ENST00000219837 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
KNOP1-201ENST00000219837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
KNOP1-201ENST00000219837 VWA3AA6NCI4 1184 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 SKILP12757 684 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 ANKS4BQ8N8V4 417 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 SMC6Q96SB8 1091 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
KNOP1-201ENST00000219837 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
KNOP1-201ENST00000219837 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
KNOP1-201ENST00000219837 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 UBLCP1Q8WVY7 318 aaPredicted RBP12.47□□□□□ -0.41
KNOP1-201ENST00000219837 TRPC3Q13507 836 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
KNOP1-201ENST00000219837 IFT74Q96LB3 600 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 ITGA6P23229 1130 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 SMTNP53814 917 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 SLC8A3P57103 927 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 USH1GQ495M9 461 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 KIAA1524Q8TCG1 905 aa12.47□□□□□ -0.41
KNOP1-201ENST00000219837 DACT1Q9NYF0 836 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms