RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mug1P28665 1476 aa13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Ankrd35E9Q9D8 996 aa13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Pym1Q8CHP5 203 aaKnown RBP13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Grm8P47743 908 aa13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Ptcd1Q8C2E4 695 aaKnown RBP13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Terf2ipQ91VL8 393 aa13.35□□□□□ -0.27
Trim56-201ENSMUST00000054384 Calml3Q9D6P8 149 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 OvosQ3UU35 1456 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Myl3P09542 204 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Kif5aP33175 1027 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Trak2Q6P9N8 913 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Atp1a2Q6PIE5 1020 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Bbs5Q9CZQ9 341 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 GnpatP98192 678 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Maip1Q8BHE8 291 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Slx4Q6P1D7 1565 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Tekt3Q6X6Z7 490 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Ccdc13D3YV10 709 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Ttll12Q3UDE2 639 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Traf3ip3Q8C0G2 513 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Grpel1Q99LP6 217 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Lrrc74aA0A1Y7VMD6 494 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Capn2O08529 700 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Trim27Q62158 513 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Atp6v0a4Q920R6 833 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 NapaQ9DB05 295 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Krt90E9Q1Z0 538 aa13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Nop9Q8BMC4 636 aaKnown RBP13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 PogzQ8BZH4 1409 aaKnown RBP13.34□□□□□ -0.27
Trim56-201ENSMUST00000054384 Frmpd2A0A140LI67 1392 aa13.33□□□□□ -0.27
Trim56-201ENSMUST00000054384 Pnpla2Q8BJ56 486 aa13.33□□□□□ -0.27
Trim56-201ENSMUST00000054384 RalgapbQ8BQZ4 1484 aa13.33□□□□□ -0.27
Trim56-201ENSMUST00000054384 Prr29B1ARI9 187 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Sox13Q04891 613 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Pex1Q5BL07 1284 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Bag2Q91YN9 210 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Taf4E9QAP7 1042 aaKnown RBP13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Skida1Q80YR3 822 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Lonp1Q8CGK3 949 aaKnown RBP13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Hexim1Q8R409 356 aaKnown RBP13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Klhdc4Q921I2 584 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 AqrQ8CFQ3 1481 aaKnown RBP13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Oas2E9Q9A9 742 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 MycbpapQ5SUV2 932 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 TrdnE9Q9K5 693 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 EnahQ03173 802 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Rdm1Q9CQK3 281 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 LifrP42703 1092 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Cdr2P97817 455 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Bfsp1A2AMT1 669 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Mx1P09922 631 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Abcb4P21440 1276 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Senp1P59110 640 aa13.33□□□□□ -0.28
Trim56-201ENSMUST00000054384 Becn2P0DM65 447 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 PpardP35396 440 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Fam163aQ8CAA5 168 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Tmem143Q8VD26 458 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Tpx2A2APB8 745 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Bzw2Q91VK1 419 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Pde6cQ91ZQ1 861 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Kdm2bQ6P1G2 1309 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 F2rP30558 430 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Zap70P43404 618 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Morc4Q8BMD7 928 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 PpanQ91YU8 470 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Sestd1Q80UK0 696 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Prpf31Q8CCF0 499 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Asic2Q925H0 512 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Stmn1P54227 149 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Ccdc162pQ0VG85 912 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Gm5935Q497S0 212 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Klhl20Q8VCK5 604 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Ccdc82Q6PG04 518 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Tab2Q99K90 693 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Efcab2Q9CQ46 164 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 CacybpQ9CXW3 229 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Rufy3Q9D394 469 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Dpf1Q9QX66 387 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Cyp2ab1S4R196 498 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Dnajc21E9Q8D0 531 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Krt19P19001 403 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Rab34Q64008 259 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Vat1lQ80TB8 417 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Kiaa1024Q8K3V7 917 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Mis12Q9CY25 206 aa13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Rfwd2Q9R1A8 733 aaKnown RBP13.32□□□□□ -0.28
Trim56-201ENSMUST00000054384 Tspyl1O88852 379 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 WaplQ65Z40 1200 aaKnown RBP13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Pih1h3bQ8C6P5 218 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Slc4a8Q8JZR6 1089 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Lmbr1lQ9D1E5 489 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 SarnpQ9D1J3 210 aaKnown RBP13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Pdia3P27773 505 aaKnown RBP13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Cd274Q9EP73 290 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Lrriq3Q14DL3 633 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Ano8Q6PB70 1060 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Krit1Q6S5J6 736 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Znf830Q8R1N0 363 aaKnown RBP13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Stx12Q9ER00 274 aa13.31□□□□□ -0.28
Trim56-201ENSMUST00000054384 Ak2Q9WTP6 239 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 76.3 ms