RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 HPRT1P00492 218 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 IGLV2-14P01704 120 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 IL3RAP26951 378 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
PHGDH-234ENST00000642041 TAS2R30P59541 319 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 ID3Q02535 119 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 C17orf58Q2M2W7 97 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 PRR31Q5SQ13 230 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 LINC00311Q8N616 119 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 OR4D5Q8NGN0 318 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 NEIL1Q96FI4 390 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-234ENST00000642041 RNF126Q9BV68 326 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 ZC4H2Q9NQZ6 224 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 A0A087X0M5 115 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 A0A1B0GX30 115 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 JTBO76095 146 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 IGHV2-70P01814 119 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 AKR1C2P52895 323 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 S100A10P60903 97 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 VAMP2P63027 116 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 BAXQ07812 192 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 ZCCHC24Q8N2G6 241 aaKnown RBP14.11□□□□□ -0.15
PHGDH-234ENST00000642041 FAM216BQ8N7L0 139 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 TPRX1Q8N7U7 411 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 RFESDQ8TAC1 157 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 C8orf46Q8TAG6 207 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 STOML3Q8TAV4 291 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 FAM168AQ92567 244 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 TMEM186Q96B77 213 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 SDHAF2Q9NX18 166 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 PSG11Q9UQ72 335 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 BOLA1Q9Y3E2 137 aa14.11□□□□□ -0.15
PHGDH-234ENST00000642041 DVL1O14640 695 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 TOR1AO14656 332 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 TPT1P13693 172 aaKnown RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 S100A1P23297 94 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 EFNA4P52798 201 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 ERVK-16P61578 105 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 EIF4EBP1Q13541 118 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 FAM201AQ5SY85 155 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 ZNF525Q8N782 197 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 ZNF596Q8TC21 504 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 C10orf105Q8TEF2 133 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 SCARB1Q8WTV0 552 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 TCTEX1D2Q8WW35 142 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 CIB3Q96Q77 187 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 HEXA-AS1Q9H8Q6 139 aa14.1□□□□□ -0.15
PHGDH-234ENST00000642041 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-234ENST00000642041 NBEAL2Q6ZNJ1 2754 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 BORCS7-ASMTA0A0B4J1R7 106 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 F5H0A9 414 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-234ENST00000642041 RPL12P30050 165 aaKnown RBP14.09□□□□□ -0.15
PHGDH-234ENST00000642041 DUTP33316 252 aaKnown RBP14.09□□□□□ -0.15
PHGDH-234ENST00000642041 LPAR6P43657 344 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 PRRX1P54821 245 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 HIST2H2BDQ6DRA6 164 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 SLC25A48Q6ZT89 311 aaKnown RBP14.09□□□□□ -0.15
PHGDH-234ENST00000642041 SPAG16Q8N0X2 631 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 FGFRL1Q8N441 504 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 OR4S2Q8NH73 311 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
PHGDH-234ENST00000642041 RNF222A6NCQ9 220 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 TNFSF12O43508 249 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 PITX3O75364 302 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 HRASP01112 189 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 MBPP02686 304 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-234ENST00000642041 MIDNQ504T8 468 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 TMEM200BQ69YZ2 307 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 LHFPL5Q8TAF8 219 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 H1FXQ92522 213 aaKnown RBP14.08□□□□□ -0.16
PHGDH-234ENST00000642041 SLC25A32Q9H2D1 315 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 LSM5Q9Y4Y9 91 aaKnown RBP14.08□□□□□ -0.16
PHGDH-234ENST00000642041 WSB1Q9Y6I7 421 aa14.08□□□□□ -0.16
PHGDH-234ENST00000642041 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 TXNL1O43396 289 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 LIPFP07098 398 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 NQO2P16083 231 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 COL8A2P25067 703 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 RPP30P78346 268 aaKnown RBP14.07□□□□□ -0.16
PHGDH-234ENST00000642041 CLLU1Q5K131 121 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 C1orf122Q6ZSJ8 110 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 H2BFWTQ7Z2G1 175 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 ZNF439Q8NDP4 499 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 OR9G1Q8NH87 305 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 PCGF1Q9BSM1 259 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 RNF150Q9ULK6 438 aa14.07□□□□□ -0.16
PHGDH-234ENST00000642041 DSCAML1Q8TD84 2053 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 C17orf98A8MV24 154 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 MPTX1A8MV57 137 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 VENTXO95231 258 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 SCGB1D2O95969 90 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 NFYBP25208 207 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 MC5RP33032 325 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 ZNF266Q14584 549 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 RTL8BQ17RB0 113 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 ZNF585BQ52M93 769 aa14.06□□□□□ -0.16
PHGDH-234ENST00000642041 BAP18Q8IXM2 172 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms