RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 ABCA1O95477 2261 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 MDFIC2A0A1B0GVS7 189 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 TCF21O43680 179 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 CRLF1O75462 422 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 ACTL6BO94805 426 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 CRYBA1P05813 215 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 OR5AC1P0C628 307 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 OR4E1P0C645 316 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 DYNLT3P51808 116 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 SLC9A3R2Q15599 337 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 THNSL2Q86YJ6 484 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 LGI3Q8N145 548 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 ADAD2Q8NCV1 583 aaKnown RBP10.44□□□□□ -0.74
PHGDH-220ENST00000641570 DUSP18Q8NEJ0 188 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 OR8H1Q8NGG4 311 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 RNF5Q99942 180 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 RASL11BQ9BPW5 248 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 RTBDNQ9BSG5 229 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-220ENST00000641570 COMMD9Q9P000 198 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 POMT1Q9Y6A1 747 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 OTOGQ6ZRI0 2925 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 DSCAML1Q8TD84 2053 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
PHGDH-220ENST00000641570 LINC00473A8K010 186 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 VGLL3A8MV65 326 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 M0QZK8 103 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.747e-8■■□□□ 12.4
PHGDH-220ENST00000641570 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-220ENST00000641570 SSNA1O43805 119 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 VENTXO95231 258 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 IFNA21P01568 189 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 NQO2P16083 231 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 PAX6P26367 422 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 LPAR6P43657 344 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 LGALS7P47929 136 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 THOC7Q6I9Y2 204 aaKnown RBP10.43□□□□□ -0.74
PHGDH-220ENST00000641570 CCBE1Q6UXH8 406 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-220ENST00000641570 Q6YL49 198 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 C16orf82Q7Z2V1 217 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 LYG2Q86SG7 212 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 GPHA2Q96T91 129 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-220ENST00000641570 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 TCF19Q9Y242 345 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 MOB4Q9Y3A3 225 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 HIVEP2P31629 2446 aa10.43□□□□□ -0.74
PHGDH-220ENST00000641570 SNAPC5O75971 98 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 SPDEFO95238 335 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 SFT2D2O95562 160 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 IGLV2-14P01704 120 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 IGHV4-59P01825 116 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 CD24P25063 80 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 RAG2P55895 527 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 SP6Q3SY56 376 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM268Q5VZI3 342 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 LIN54Q6MZP7 749 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 MRGPRFQ96AM1 343 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 SLC25A33Q9BSK2 321 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM222Q9H0R3 208 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 PLEKHA2Q9HB19 425 aa10.42□□□□□ -0.74
PHGDH-220ENST00000641570 A0A0A6YYJ9 748 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 NBR2O15453 112 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 OR2F2O95006 317 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 S1PR2O95136 353 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 IER3P46695 156 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 RPL30P62888 115 aaKnown RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 DHRS2Q13268 280 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM177Q53S58 311 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 C9orf152Q5JTZ5 239 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 SSX9Q7RTT3 188 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 OR4A16Q8NH70 328 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 ZNF431Q8TF32 576 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 CFHR4Q92496 578 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 RBPMSQ93062 196 aaKnown RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 GALNT14Q96FL9 552 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 EAF1Q96JC9 268 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 TP53RKQ96S44 253 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
PHGDH-220ENST00000641570 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 METTL1Q9UBP6 276 aaKnown RBP10.41□□□□□ -0.74
PHGDH-220ENST00000641570 DUXBA0A1W2PPF3 345 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 RAMP3O60896 148 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms