RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 C9orf50Q5SZB4 431 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 ALKBH2Q6NS38 261 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 TMEM14EPQ6UXP3 125 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 SFTPA2Q8IWL1 248 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 OR5A1Q8NGJ0 315 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 OR1K1Q8NGR3 316 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 LYZL4Q96KX0 146 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 CFHR5Q9BXR6 569 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 CXXC4Q9H2H0 198 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
HNRNPU-230ENST00000640657 A0A1W2PQF6 199 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 A6NNC1 897 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 H0Y8G0 127 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CORTO00230 105 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 SYNGR3O43761 229 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TNFSF15O95150 251 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 P01737 135 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TIMP3P35625 211 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TCL1AP56279 114 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 IL11RAQ14626 422 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 MMDQ15546 238 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 C9orf135Q5VTT2 229 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 SLC23A3Q6PIS1 610 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 BCL2L2Q92843 193 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 WDR54Q9H977 334 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 PSG11Q9UQ72 335 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TRPM6Q9BX84 2022 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 SLC25A5P05141 298 aaKnown RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 GPX1P07203 203 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TMEM11P17152 192 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TRA2AQ13595 282 aaKnown RBP eCLIP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TMEM240Q5SV17 173 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 FOXL2NBQ6ZUU3 175 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 PDPNQ86YL7 162 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 FAM131CQ96AQ9 280 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CHCHD1Q96BP2 118 aaKnown RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 NUDT11Q96G61 164 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 AURKAIP1Q9NWT8 199 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 RPH3ALQ9UNE2 315 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 WDR83OSQ9Y284 106 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CASP8AP2Q9UKL3 1982 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 POLR2AP24928 1970 aaKnown RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 A0A1B0GW15 77 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 OTOL1A6NHN0 477 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 KLRC4-KLRK1H3BQV0 150 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CER1O95813 267 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CA2P00918 260 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 C8orf88P0DMB2 117 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 WNT5AP41221 380 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CAMPP49913 170 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 RPL31P62899 125 aaKnown RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 HIST1H1AQ02539 215 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TMEM30BQ3MIR4 351 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 ZNF718Q3SXZ3 478 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 DHRS13Q6UX07 377 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 DMRTC2Q8IXT2 367 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 OR10D3Q8NH80 312 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 SIGLEC12Q96PQ1 595 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 C1QTNF5Q9BXJ0 243 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 PLA2G2FQ9BZM2 168 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 LINC00470Q9BZP3 86 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 VCX2Q9H322 139 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 DUSP13Q9UII6 198 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 PLXNA2O75051 1894 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 WIPF3A6NGB9 483 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 FOXI3A8MTJ6 420 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CELA2BP08218 269 aaPredicted RBP4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 NPSP0C0P6 89 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CD46P15529 392 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 CA6P23280 308 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 MESP2Q0VG99 397 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 LTC4SQ16873 150 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 GAB4Q2WGN9 574 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 TMEM42Q69YG0 159 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 DRAM1Q8N682 238 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 VSTM2AQ8TAG5 236 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 PERPQ96FX8 193 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 DIRC2Q96SL1 478 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 IL36RNQ9UBH0 155 aa4.27□□□□□ -1.73
HNRNPU-230ENST00000640657 A0A096LPE4 126 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 TRAV38-1A0A0B4J264 116 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 A0A1W2PPZ6 126 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 NAPSAO96009 420 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 CLPSP04118 112 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 WNT2P09544 360 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 CENPWQ5EE01 88 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 VASH2Q86V25 355 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 TMEM256Q8N2U0 113 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 RPP25LQ8N5L8 163 aaKnown RBP4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 OR52E5Q8NH55 327 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 GATAD1Q8WUU5 269 aa4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
HNRNPU-230ENST00000640657 FAM173AQ9BQD7 235 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms