RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ZNF816Q0VGE8 651 aaPredicted RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 LSAMPQ13449 338 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 IL13RA2Q14627 380 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SNAI3Q3KNW1 292 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 OR10K2Q6IF99 312 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 HSD17B13Q7Z5P4 300 aaPredicted RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 FGFRL1Q8N441 504 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 BPIFB6Q8NFQ5 453 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SEPHS2Q99611 448 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 RHOFQ9HBH0 211 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 C20orf141Q9NUB4 165 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 IGKV1D-17A0A075B6S4 117 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 TRAV14DV4A0A0A6YYC5 116 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 TMEM127O75204 238 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF324O75467 553 aaPredicted RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 DUSP14O95147 198 aaKnown RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 CRYZL1O95825 349 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 M6PRP20645 277 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 GALP22466 123 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SLC2A5P22732 501 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 PRR20EP86478 221 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 PRR20CP86479 221 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 PRR20DP86480 221 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 PRR20BP86481 221 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 PRR20AP86496 221 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SLAQ13239 276 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 CRMP1Q14194 572 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SIGIRRQ6IA17 410 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SPSB3Q6PJ21 355 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF562Q6V9R5 426 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF781Q8N8C0 355 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 OR52N1Q8NH53 320 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 MISP3Q96FF7 219 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 DPCDQ9BVM2 203 aaPredicted RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 MRPL13Q9BYD1 178 aaKnown RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 S100A14Q9HCY8 104 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 SELENOKQ9Y6D0 94 aa3.32□□□□□ -1.88
GABRA1-220ENST00000638159 FBN1P35555 2871 aaKnown RBP3.32□□□□□ -1.88
GABRA1-220ENST00000638159 LOC102723971A0A1B0GUV8 181 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 C2orf70A6NJV1 201 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 F8VVB4 439 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 F8VWA3 439 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 BET1O15155 118 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 LANCL1O43813 399 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 GPX5O75715 221 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 CRPP02741 224 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 PTBP1P26599 531 aaKnown RBP eCLIP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 HTR1FP30939 366 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 Q3ZCU0 254 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 SPRNQ5BIV9 151 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 PDPNQ86YL7 162 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 TMEM61Q8N0U2 210 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 RNF141Q8WVD5 230 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 GTF2H4Q92759 462 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR8B4Q96RC9 309 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 PBDC1Q9BVG4 233 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF586Q9NXT0 402 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF257Q9Y2Q1 563 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 RAI1Q7Z5J4 1906 aaPredicted RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 MSGN1A6NI15 193 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 FCN1O00602 326 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 ORC5O43913 435 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 FADS2O95864 444 aaKnown RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 HIST1H1CP16403 213 aaKnown RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 CBLN1P23435 193 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 DCKP27707 260 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 PAX2Q02962 417 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 MRPL28Q13084 256 aaKnown RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 TMED1Q13445 227 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 GINS1Q14691 196 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR6M1Q8NGM8 313 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR4A16Q8NH70 328 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 FGGYQ96C11 551 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 NMD3Q96D46 503 aaKnown RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 CMTM5Q96DZ9 223 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 AMELYQ99218 206 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 HOPXQ9BPY8 73 aaPredicted RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 Q9HAA7 133 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 C19orf73Q9NVV2 129 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 JPT1Q9UK76 154 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 TMA7Q9Y2S6 64 aaKnown RBP3.31□□□□□ -1.88
GABRA1-220ENST00000638159 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 TRBV7-1A0A0A6YYK4 115 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 TMEM82A0PJX8 343 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 METTL21EPA6NDL7 271 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 CGB1A6NKQ9 187 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 GPX2P18283 190 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 BCL3P20749 454 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OPRL1P41146 370 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 DEFB114Q30KQ6 69 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR10J3Q5JRS4 329 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 DDI2Q5TDH0 399 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 KDM4DQ6B0I6 523 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 SLC35F2Q8IXU6 374 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 ZNF679Q8IYX0 411 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR4S2Q8NH73 311 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 C10orf35Q96D05 121 aa3.31□□□□□ -1.88
GABRA1-220ENST00000638159 CMSS1Q9BQ75 279 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms