RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 OR13F1Q8NGS4 319 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 NEK7Q8TDX7 302 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 C2CD4CQ8TF44 421 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 FAM46BQ96A09 425 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 YIPF6Q96EC8 236 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
SNX1-214ENST00000625244 TMEM59Q9BXS4 323 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 SELENOIQ9C0D9 397 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 BANF2Q9H503 90 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 FBXL17Q9UF56 701 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 STEAP1Q9UHE8 339 aa10.31□□□□□ -0.76
SNX1-214ENST00000625244 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
SNX1-214ENST00000625244 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 IFITM5A6NNB3 132 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 NOTOA8MTQ0 251 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 H3BUA1 57 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 NOL3O60936 208 aaKnown RBP10.3□□□□□ -0.76
SNX1-214ENST00000625244 MT-ND4P03905 459 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 IFNA4P05014 189 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 CTRB1P17538 263 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 OR3A3P47888 321 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 TCTAP57738 103 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 MXD1Q05195 221 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 P2RY14Q15391 338 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 HES5Q5TA89 166 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 STEAP3Q658P3 488 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 PRR18Q8N4B5 295 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 BVESQ8NE79 360 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 OR1L1Q8NH94 360 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 CENPOQ9BU64 300 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 FUNDC2Q9BWH2 189 aa10.3□□□□□ -0.76
SNX1-214ENST00000625244 A0A1W2PP11 408 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 MCRIP1C9JLW8 97 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 AIPO00170 330 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 GEMIN2O14893 280 aaKnown RBP10.29□□□□□ -0.76
SNX1-214ENST00000625244 CA2P00918 260 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 SDC2P34741 201 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 OR10A3P58181 314 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 LSM3P62310 102 aaKnown RBP10.29□□□□□ -0.76
SNX1-214ENST00000625244 RBMS2Q15434 407 aaKnown RBP10.29□□□□□ -0.76
SNX1-214ENST00000625244 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 ZNF833PQ6ZTB9 187 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 GRPEL2Q8TAA5 225 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 FAM3DQ96BQ1 224 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 NEDD4LQ96PU5 975 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 IFT22Q9H7X7 185 aa10.29□□□□□ -0.76
SNX1-214ENST00000625244 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
SNX1-214ENST00000625244 SMIM30A4D0T7 59 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 IGLL5B9A064 214 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 BMPR1BO00238 502 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 SPINT2O43291 252 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 RBMXL2O75526 392 aaKnown RBP10.28□□□□□ -0.76
SNX1-214ENST00000625244 HBZP02008 142 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 CD37P11049 281 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 FOLR2P14207 255 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 AADACP22760 399 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 RPL5P46777 297 aaKnown RBP10.28□□□□□ -0.76
SNX1-214ENST00000625244 CLDN12P56749 244 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
SNX1-214ENST00000625244 GNMTQ14749 295 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 MORN2Q502X0 79 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 ZNF497Q6ZNH5 498 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 ZNF645Q8N7E2 425 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 OR52B4Q8NGK2 314 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 SNAPC3Q92966 411 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 Q96M66 194 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 GFI1Q99684 422 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 ABHD14AQ9BUJ0 271 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 DAPK2Q9UIK4 370 aa10.28□□□□□ -0.76
SNX1-214ENST00000625244 C2orf70A6NJV1 201 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 TMEM14DPA8MWL7 114 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 TMEM127O75204 238 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 FUT3P21217 361 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 ALDH3B2P48448 385 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 APOC4P55056 127 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 C2orf76Q3KRA6 126 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 GPR107Q5VW38 600 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 OR10K2Q6IF99 312 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 RAB12Q6IQ22 244 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 SFXN4Q6P4A7 337 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 C11orf45Q8TAV5 145 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 TINAGL1Q9GZM7 467 aaPredicted RBP10.27□□□□□ -0.77
SNX1-214ENST00000625244 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
SNX1-214ENST00000625244 METTL1Q9UBP6 276 aaKnown RBP10.27□□□□□ -0.77
SNX1-214ENST00000625244 FBXL7Q9UJT9 491 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 RAB22AQ9UL26 194 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 PEX16Q9Y5Y5 336 aa10.27□□□□□ -0.77
SNX1-214ENST00000625244 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 SAA2-SAA4A0A096LPE2 208 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 A0A0B4J203 849 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 METTL21EPA6NDL7 271 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 M0R2N4 97 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 UBE2CO00762 179 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms