RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 ZNF75AQ96N20 296 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 C1QTNF6Q9BXI9 259 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 RANBP3Q9H6Z4 567 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 C12orf4Q9NQ89 552 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ASF1BQ9NVP2 202 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SLC2A8Q9NY64 477 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 EHFQ9NZC4 300 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ELF5Q9UKW6 265 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 SELENOKQ9Y6D0 94 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ALPK2Q86TB3 2170 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 NSD1Q96L73 2696 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 IGKV1-27A0A075B6S5 117 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 PIGBOS1A0A0B4J2F0 54 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 A8MXE2 369 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 GEMIN2O14893 280 aaKnown RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 DEGS1O15121 323 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 DIRAS3O95661 229 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 CTXN2P0C2S0 81 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 GSTT2P0CG29 244 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ZNF44P15621 663 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 CD34P28906 385 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ERP29P30040 261 aaKnown RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 CALCRP30988 508 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 GLRXP35754 106 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 CA7P43166 264 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 FABP6P51161 128 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 PSG7Q13046 419 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 KCNJ8Q15842 424 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 TAF9Q16594 264 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 MICBQ29980 383 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 SMIM21Q3B7S5 101 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 PIGYQ3MUY2 71 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ABCA11PQ4W5N1 156 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 PAN3Q58A45 887 aaKnown RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 DMRTC1Q5HYR2 192 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 OR52W1Q6IF63 320 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 LPCAT3Q6P1A2 487 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 C6orf201Q7Z4U5 140 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 TCTE3Q8IZS6 198 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 CCDC71LQ8N9Z2 235 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 DRAXINQ8NBI3 349 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 OR10G7Q8NGN6 311 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 OR11L1Q8NGX0 322 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 OR6F1Q8NGZ6 308 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 COQ8AQ8NI60 647 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ZNF431Q8TF32 576 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 MOB3AQ96BX8 217 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 HYLS1Q96M11 299 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 PHB2Q99623 299 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 SLC6A7Q99884 636 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 FAAP24Q9BTP7 215 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 BEX2Q9BXY8 128 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ALX4Q9H161 411 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 OR51I2Q9H344 312 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 FN3KRPQ9HA64 309 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 BEX1Q9HBH7 125 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 RAB9BQ9NP90 201 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 MYOZ1Q9NP98 299 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 RASL12Q9NYN1 266 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 AK3Q9UIJ7 227 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ANAPC10Q9UM13 185 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 MEMO1Q9Y316 297 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ZNF469Q96JG9 3925 aaPredicted RBP3.79□□□□□ -1.8
VPS29-212ENST00000621131 GTF3C1Q12789 2109 aa3.79□□□□□ -1.8
VPS29-212ENST00000621131 ACANP16112 2415 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 IGLV4-3A0A075B6K6 122 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 IGKV1-12A0A0C4DH73 117 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 LRRC30A6NM36 301 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 FOXI3A8MTJ6 420 aaPredicted RBP3.78□□□□□ -1.8
VPS29-212ENST00000621131 CCL21O00585 134 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 SSX5O60225 188 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 IGKV1D-12P01611 117 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 HLA-AP01891 365 aaKnown RBP3.78□□□□□ -1.8
VPS29-212ENST00000621131 C1QBP02746 253 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 SFTPBP07988 381 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 FCGR3AP08637 254 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 GIPP09681 153 aaPredicted RBP3.78□□□□□ -1.8
VPS29-212ENST00000621131 OR4E1P0C645 316 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 OR5H8P0DN80 308 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 ZNF250P15622 560 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 AKR1C4P17516 323 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 GLRA1P23415 457 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 RBMXP38159 391 aaKnown RBP3.78□□□□□ -1.8
VPS29-212ENST00000621131 MPV17P39210 176 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 CD200P41217 278 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 KCNJ3P48549 501 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 GMFBP60983 142 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 ERVS71-1P61550 626 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 FGL1Q08830 312 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 MPPED2Q15777 294 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 TMEM255AQ5JRV8 349 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 TRAT1Q6PIZ9 186 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 LYG2Q86SG7 212 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 BIVMQ86UB2 503 aa3.78□□□□□ -1.8
VPS29-212ENST00000621131 ZGRF1Q86YA3 2104 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms