RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 OR4D5Q8NGN0 318 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 PLPPR1Q8TBJ4 325 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 VAMP8Q9BV40 100 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 HELTA6NFD8 242 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 TOX4O94842 621 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 MMP7P09237 267 aaPredicted RBP11.78□□□□□ -0.52
CNOT3-210ENST00000618939 SLC25A10Q9UBX3 287 aaPredicted RBP11.78□□□□□ -0.52
CNOT3-210ENST00000618939 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 K7N7A8 449 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 CECR9P0C854 216 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 TNXAQ16473 311 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 WDR25Q64LD2 544 aaPredicted RBP11.77□□□□□ -0.52
CNOT3-210ENST00000618939 VWA1Q6PCB0 445 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 PARD6AQ9NPB6 346 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF407Q9C0G0 2248 aa11.77□□□□□ -0.52
CNOT3-210ENST00000618939 A0A087X0M5 115 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 A0A1B0GX30 115 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 E9PLN8 166 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 REG1BP48304 166 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 LRRC75BQ2VPJ9 315 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 ACP7Q6ZNF0 438 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 FOXL2NBQ6ZUU3 175 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 TXNDC17Q9BRA2 123 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 SEBOXQ9HB31 216 aaPredicted RBP11.77□□□□□ -0.53
CNOT3-210ENST00000618939 FAM90A27PA6NNH2 459 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 TNFSF10P50591 281 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 TMEM42Q69YG0 159 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 PCGF1Q9BSM1 259 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 METTL1Q9UBP6 276 aaKnown RBP11.77□□□□□ -0.53
CNOT3-210ENST00000618939 COL4A3Q01955 1670 aa11.77□□□□□ -0.53
CNOT3-210ENST00000618939 IGHV1-2P23083 117 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 RANP62826 216 aaKnown RBP11.76□□□□□ -0.53
CNOT3-210ENST00000618939 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
CNOT3-210ENST00000618939 GPR61Q9BZJ8 451 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 PARLQ9H300 379 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 ACACAQ13085 2346 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 IFNL4K9M1U5 179 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 KBTBD11O94819 623 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 CD3EP07766 207 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 GFRA1P56159 465 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 TCF19Q9Y242 345 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 OBSL1O75147 1896 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 CD5P06127 495 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 AMTP48728 403 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 Q0VFX4 171 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 TMEM105Q8N8V8 129 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 MS4A5Q9H3V2 200 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 CDX1P47902 265 aaPredicted RBP11.76□□□□□ -0.53
CNOT3-210ENST00000618939 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF525Q8N782 197 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 PPIAL4AQ9Y536 164 aa11.76□□□□□ -0.53
CNOT3-210ENST00000618939 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 TMEM250H0YL14 139 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 OR10J1P30954 320 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 B3GALT5-AS1P59052 145 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 PDPNQ86YL7 162 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 OR4X1Q8NH49 305 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 ABHD12Q8N2K0 398 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 COX19Q49B96 90 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 FAM216AQ8WUB2 273 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 SPSB4Q96A44 273 aa11.75□□□□□ -0.53
CNOT3-210ENST00000618939 ZNF253O75346 499 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 IER3P46695 156 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 CAMPP49913 170 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 CD81P60033 236 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 HGFACQ04756 655 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 KLHDC1Q8N7A1 406 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 SNURFLB1AK76 121 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 RPL29P47914 159 aaKnown RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 NOL4LQ96MY1 436 aaPredicted RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 QTRT1Q9BXR0 403 aaKnown RBP11.74□□□□□ -0.53
CNOT3-210ENST00000618939 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
CNOT3-210ENST00000618939 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms