RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 TRAV8-4A0A0B4J246 113 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 SOCS1O15524 211 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 IGLV3-25P01717 112 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 ASAH2BP0C7U1 165 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 MBNL2Q5VZF2 373 aaKnown RBP12.87□□□□□ -0.35
UBE3A-207ENST00000614096 CCL17Q92583 94 aa12.87□□□□□ -0.35
UBE3A-207ENST00000614096 MRPL24Q96A35 216 aaKnown RBP12.87□□□□□ -0.35
UBE3A-207ENST00000614096 IGHV3-20A0A0C4DH32 117 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 WNT5AP41221 380 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 PRDM13Q9H4Q3 707 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 A0A1B0GUT8 65 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 HOXA5P20719 270 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 CNTFRP26992 372 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 RFLNAQ6ZTI6 216 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 MMD2Q8IY49 270 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 KIR3DL3Q8N743 410 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 DDB2Q92466 427 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 AURKAIP1Q9NWT8 199 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-207ENST00000614096 DLL1O00548 723 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 CD8AP01732 235 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-207ENST00000614096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE3A-207ENST00000614096 LHFPL4Q7Z7J7 247 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 FGF22Q9HCT0 170 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
UBE3A-207ENST00000614096 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-207ENST00000614096 PPP1R3EQ9H7J1 279 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
UBE3A-207ENST00000614096 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 MEGF9Q9H1U4 602 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ASPDHA6ND91 283 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 TNFRSF9Q07011 255 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 A8MWV9 139 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 LDLRAD2Q5SZI1 272 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 KLK2P20151 261 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 C2orf16Q68DN1 1984 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 MGAMO43451 1857 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 IGLV3-16A0A075B6K0 115 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 LGALS1P09382 135 aaKnown RBP12.85□□□□□ -0.35
UBE3A-207ENST00000614096 SNAI3Q3KNW1 292 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 CT83Q5H943 113 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ZNF324BQ6AW86 544 aaPredicted RBP12.85□□□□□ -0.35
UBE3A-207ENST00000614096 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 RABAC1Q9UI14 185 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 IFNL4K9M1U5 179 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ZNF83P51522 516 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ISG15P05161 165 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ALKBH6Q3KRA9 238 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 ORMDL3Q8N138 153 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 PRSS27Q9BQR3 290 aa12.85□□□□□ -0.35
UBE3A-207ENST00000614096 GPR183P32249 361 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 SARGQ9BW04 601 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 GFRALQ6UXV0 394 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 MARF1Q9Y4F3 1742 aaKnown RBP12.84□□□□□ -0.35
UBE3A-207ENST00000614096 NR2C2APQ86WQ0 139 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 NUDT8Q8WV74 236 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.84□□□□□ -0.35
UBE3A-207ENST00000614096 OR2H1Q9GZK4 316 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 RBM11P57052 281 aaKnown RBP12.84□□□□□ -0.35
UBE3A-207ENST00000614096 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
UBE3A-207ENST00000614096 LAMTOR1Q6IAA8 161 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 RRHO14718 337 aa12.84□□□□□ -0.35
UBE3A-207ENST00000614096 J3QT63 122 aa12.83□□□□□ -0.35
UBE3A-207ENST00000614096 CX3CL1P78423 397 aa12.83□□□□□ -0.35
UBE3A-207ENST00000614096 MARS2Q96GW9 593 aaKnown RBP12.83□□□□□ -0.35
UBE3A-207ENST00000614096 SMIM8Q96KF7 97 aa12.83□□□□□ -0.35
UBE3A-207ENST00000614096 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
UBE3A-207ENST00000614096 RND3P61587 244 aa12.83□□□□□ -0.36
UBE3A-207ENST00000614096 PNKDQ8N490 385 aa12.83□□□□□ -0.36
UBE3A-207ENST00000614096 C14orf144Q96I85 54 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1030.1 ms