RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SPSB4Q96A44 273 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 PRNDQ9UKY0 176 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 MARCH11A6NNE9 402 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 GNB1P62873 340 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 PET117Q6UWS5 81 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 TMEM171Q8WVE6 324 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 IMMP2LQ96T52 175 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 DNAJC4Q9NNZ3 241 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 ANAPC1Q9H1A4 1944 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 M0R1B8 84 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 CLPSP04118 112 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 MAGEA5P43359 124 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 C3AR1Q16581 482 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
VPS36-207ENST00000611132 HIF1ANQ9NWT6 349 aa12.47□□□□□ -0.41
VPS36-207ENST00000611132 IGHV1-45A0A0A0MS14 117 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 BMPR1BO00238 502 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.41
VPS36-207ENST00000611132 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 FAM122AQ96E09 287 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 RBM14Q96PK6 669 aaKnown RBP12.46□□□□□ -0.41
VPS36-207ENST00000611132 VSIRQ9H7M9 311 aa12.46□□□□□ -0.41
VPS36-207ENST00000611132 CHCHD2Q9Y6H1 151 aaPredicted RBP12.46□□□□□ -0.41
VPS36-207ENST00000611132 LOC102724200A0A096LPH7 203 aaPredicted RBP12.46□□□□□ -0.42
VPS36-207ENST00000611132 ODAMA1E959 279 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 P01737 135 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 COX5BP10606 129 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 ORM2P19652 201 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 GABRA6Q16445 453 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 C3orf80F5H4A9 247 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 ATP5G3P48201 142 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 TFF3Q07654 80 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 FXYD3Q14802 87 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 ARSJQ5FYB0 599 aaPredicted RBP12.46□□□□□ -0.42
VPS36-207ENST00000611132 IL36BQ9NZH7 164 aa12.46□□□□□ -0.42
VPS36-207ENST00000611132 A0A1W2PR77 199 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 J3QR06 171 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 FBXW9Q5XUX1 488 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 SPSB3Q6PJ21 355 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 DPRXA6NFQ7 191 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 CSRP1P21291 193 aaKnown RBP12.45□□□□□ -0.42
VPS36-207ENST00000611132 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
VPS36-207ENST00000611132 PLXNA2O75051 1894 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 IGKV1-12A0A0C4DH73 117 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 EFNA2O43921 213 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 TIAF1O95411 115 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 IGKV1D-12P01611 117 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 AMY1AP04745 511 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 CRYBB3P26998 211 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 OR4A47Q6IF82 309 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 ATOH7Q8N100 152 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 TMEM45BQ96B21 275 aa12.45□□□□□ -0.42
VPS36-207ENST00000611132 ZNF664Q8N3J9 261 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 OPN3Q9H1Y3 402 aaPredicted RBP12.44□□□□□ -0.42
VPS36-207ENST00000611132 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 SLC17A3O00476 420 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 GCHFRP30047 84 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 PCOLCEQ15113 449 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 TBL2Q9Y4P3 447 aaKnown RBP12.44□□□□□ -0.42
VPS36-207ENST00000611132 SNRNP200O75643 2136 aaKnown RBP12.44□□□□□ -0.42
VPS36-207ENST00000611132 WNT5AP41221 380 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 SERF1AO75920 110 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 GZMBP10144 247 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 OR5P3Q8WZ94 311 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
VPS36-207ENST00000611132 C5orf63A6NC05 138 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 NEURL1O76050 574 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 C12orf54Q6X4T0 127 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 FADS6Q8N9I5 356 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 IFITM10A6NMD0 228 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 COL8A1P27658 744 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 CEBPDP49716 269 aaPredicted RBP12.43□□□□□ -0.42
VPS36-207ENST00000611132 C10orf113Q5VZT2 155 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 ABCA7Q8IZY2 2146 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 SMRP1Q8NCR6 262 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 C1QTNF9P0C862 333 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
VPS36-207ENST00000611132 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
VPS36-207ENST00000611132 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
VPS36-207ENST00000611132 RND2P52198 227 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 TCF23Q7RTU1 214 aa12.42□□□□□ -0.42
VPS36-207ENST00000611132 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms