RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ERG28Q9UKR5 140 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 NPHP4O75161 1426 aaPredicted RBP3.34□□□□□ -1.88
LINC00397-202ENST00000606785 ANKRD50Q9ULJ7 1429 aa3.34□□□□□ -1.88
LINC00397-202ENST00000606785 MAGI2Q86UL8 1455 aa3.34□□□□□ -1.88
LINC00397-202ENST00000606785 PLEKHH2Q8IVE3 1493 aa3.34□□□□□ -1.88
LINC00397-202ENST00000606785 ZMYM4Q5VZL5 1548 aa3.34□□□□□ -1.88
LINC00397-202ENST00000606785 C2orf16Q68DN1 1984 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 IGKV1-27A0A075B6S5 117 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 A0A0J9YY10 115 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 FAM240AA0A1B0GVK7 77 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 A0A1B0GX78 115 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 A0A1W2PP18 115 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 TMEM189A5PLL7 270 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 E7EQ34 232 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MYL12BO14950 172 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MRPS14O60783 128 aaKnown RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 EDF1O60869 148 aaKnown RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 YIF1AO95070 293 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 TRBV12-3P01733 135 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 OPN1SWP03999 348 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 APODP05090 189 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 DBIP07108 87 aaKnown RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 CRYGDP07320 174 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ADRA2AP08913 450 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ESDP10768 282 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 CYBAP13498 195 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MDKP21741 143 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 CD34P28906 385 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PYCR1P32322 319 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 GABRA2P47869 451 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF133P52736 654 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 AQP5P55064 265 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ARPP19P56211 112 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MTPNP58546 118 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PSG4Q00888 419 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PNOCQ13519 176 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PEA15Q15121 130 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PMVKQ15126 192 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF404Q494X3 552 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ATP6AP1LQ52LC2 224 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 TSPO2Q5TGU0 170 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 KDM4DQ6B0I6 523 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZFAND6Q6FIF0 208 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 OPN5Q6U736 354 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF720Q7Z2F6 126 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 FAM19A5Q7Z5A7 132 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 UBALD2Q8IYN6 164 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF567Q8N184 647 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MMGT1Q8N4V1 131 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 OR5A2Q8NGI9 324 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 OR4X1Q8NH49 305 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 OR5W2Q8NH69 310 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 DOK4Q8TEW6 326 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MALSU1Q96EH3 234 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF488Q96MN9 340 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 GPER1Q99527 375 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 CDX2Q99626 313 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PDCD1LG2Q9BQ51 273 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 HSPB9Q9BQS6 159 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 SFXN3Q9BWM7 321 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 COA1Q9GZY4 146 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 UBQLN4Q9NRR5 601 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 DOK5Q9P104 306 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 TNFSF18Q9UNG2 199 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 SIGLEC7Q9Y286 467 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 LSM5Q9Y4Y9 91 aaKnown RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 SNX10Q9Y5X0 201 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 ABCA5Q8WWZ7 1642 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 CDC42BPBQ9Y5S2 1711 aa3.33□□□□□ -1.88
LINC00397-202ENST00000606785 N4BP2Q86UW6 1770 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-202ENST00000606785 MYH6P13533 1939 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 TRAV38-1A0A0B4J264 116 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 IFITM5A6NNB3 132 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 D6RAR5 112 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 NDUFC2-KCTD14E9PQ53 114 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 RPL36A-HNRNPH2H7BZ11 118 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 PSPHP1O15172 72 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 HBZP02008 142 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 MT-ND4LP03901 98 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 MMP7P09237 267 aaPredicted RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF823P16415 610 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF14P17017 642 aaPredicted RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 EIF5AP63241 154 aaKnown RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 HIST1H3AP68431 136 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 H3F3AP84243 136 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 DEFA5Q01523 94 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 OR8B8Q15620 311 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 IAH1Q2TAA2 248 aaPredicted RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 TRMT12Q53H54 448 aaKnown RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 FAM78AQ5JUQ0 283 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 TMEM236Q5W0B7 351 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
LINC00397-202ENST00000606785 PRSS54Q6PEW0 395 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 TBPL2Q6SJ96 375 aa3.32□□□□□ -1.88
LINC00397-202ENST00000606785 HIST2H3AQ71DI3 136 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms