RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-208	ENST00000596304	TMEM272	A0A1B0GTI8	110 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	CASQ2	O14958	399 aa	Predicted RBP	10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	IFNA6	P05013	189 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	FCGR3A	P08637	254 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	SERPINB10	P48595	397 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	TNXA	Q16473	311 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	ADAD2	Q8NCV1	583 aa	Known RBP	10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	FAM3D	Q96BQ1	224 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	FAM110A	Q9BQ89	295 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	PLEKHA3	Q9HB20	300 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	SIGLEC8	Q9NYZ4	499 aa		10.41	□□□□□ -0.74
UBA52-208	ENST00000596304	TRBV6-7	A0A0A0MS04	114 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	MSGN1	A6NI15	193 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	DENR	O43583	198 aa	Known RBP	10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	PRH1	P02810	166 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	OR9G9	P0C7N8	305 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	HSMCR30	P0CW71	290 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	MECP2	P51608	486 aa	Known RBP	10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	CBX3	Q13185	183 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	TPBG	Q13641	420 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	TATDN3	Q17R31	274 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	HES5	Q5TA89	166 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	IDO2	Q6ZQW0	420 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	OR10J5	Q8NHC4	309 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	USMG5	Q96IX5	58 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	SCN3B	Q9NY72	215 aa		10.4	□□□□□ -0.74
UBA52-208	ENST00000596304	SHISA3	A0PJX4	238 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	LINC00473	A8K010	186 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	BMPR1B	O00238	502 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	ARL6IP5	O75915	188 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	OR2A4	O95047	310 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	CALR	P27797	417 aa	Known RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	CD81	P60033	236 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	MRPS15	P82914	257 aa	Known RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	RTL8B	Q17RB0	113 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	VMA21	Q3ZAQ7	101 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	TEX45	Q8NA69	505 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	SRSF12	Q8WXF0	261 aa	Known RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	DDB2	Q92466	427 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	SNAPC3	Q92966	411 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	AKIP1	Q9NQ31	210 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	PEMT	Q9UBM1	199 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	RBM7	Q9Y580	266 aa	Known RBP	10.39	□□□□□ -0.75
UBA52-208	ENST00000596304	CEPT1	Q9Y6K0	416 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304		V9GY05	133 aa		10.39	□□□□□ -0.75
UBA52-208	ENST00000596304		A0A075B6Q4	140 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	MPPED1	O15442	326 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	CRYZL1	O95825	349 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	CD7	P09564	240 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	RRAS	P10301	218 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	GNB3	P16520	340 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	EDN2	P20800	178 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	DUT	P33316	252 aa	Known RBP	10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	UBE2K	P61086	200 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	RHOG	P84095	191 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	FABP5	Q01469	135 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	TAGLN	Q01995	201 aa	Known RBP	10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	ZNF45	Q02386	682 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	EXOSC2	Q13868	293 aa	Known RBP	10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	PRSS8	Q16651	343 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	CD300E	Q496F6	205 aa	Predicted RBP	10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	OR2K2	Q8NGT1	345 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	ACOT12	Q8WYK0	555 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	RAB3C	Q96E17	227 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	WFDC10A	Q9H1F0	79 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	HIPK2	Q9H2X6	1198 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	RAB22A	Q9UL26	194 aa		10.38	□□□□□ -0.75
UBA52-208	ENST00000596304	IGKV1D-8	A0A087WSZ0	117 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304		A0A0B4J203	849 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	ZNF785	A8K8V0	405 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	MFNG	O00587	321 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	MLLT11	Q13015	90 aa	Predicted RBP	10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	TRAM1	Q15629	374 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	C10orf55	Q5SWW7	151 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	DEFB125	Q8N687	156 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	OR10R2	Q8NGX6	335 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	NEURL2	Q9BR09	285 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	GINS4	Q9BRT9	223 aa		10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.37	□□□□□ -0.75
UBA52-208	ENST00000596304	TRBV9	A0A0B4J1U6	114 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	RBMY1B	A6NDE4	496 aa	Known RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	RBMY1E	A6NEQ0	496 aa	Known RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	FAM223B	A6NKX1	122 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304		J3QRK9	145 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	RAB27B	O00194	218 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	AIRE	O43918	545 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	DIRAS3	O95661	229 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	RBMY1D	P0C7P1	496 aa	Known RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	SAA1	P0DJI8	122 aa	Predicted RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	PSMA1	P25786	263 aa	Known RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	OR10A3	P58181	314 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	ATP5G2	Q06055	141 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	FAM223A	Q8IWN6	122 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	OSR1	Q8TAX0	266 aa	Predicted RBP	10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	ADTRP	Q96IZ2	230 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	VCX	Q9H320	206 aa		10.36	□□□□□ -0.75
UBA52-208	ENST00000596304	DUSP21	Q9H596	190 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms