RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 AMMECR1Q9Y4X0 333 aaPredicted RBP16.88■□□□□ 0.29
PNKP-203ENST00000593946 UNC79Q9P2D8 2635 aa16.88■□□□□ 0.29
PNKP-203ENST00000593946 A0A096LNT2 108 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 MARCH11A6NNE9 402 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 PITX3O75364 302 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 PET100P0DJ07 73 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 LYL1P12980 280 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 EPHA1P21709 976 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 USF1P22415 310 aaPredicted RBP16.87■□□□□ 0.29
PNKP-203ENST00000593946 REG1BP48304 166 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 DVL1P1P54792 670 aaPredicted RBP16.87■□□□□ 0.29
PNKP-203ENST00000593946 S100A10P60903 97 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 KLRD1Q13241 179 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 SMCO1Q147U7 214 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 LGALSLQ3ZCW2 172 aaPredicted RBP16.87■□□□□ 0.29
PNKP-203ENST00000593946 PRSS54Q6PEW0 395 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 OR5AN1Q8NGI8 311 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 R3HDM4Q96D70 268 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 NABP2Q9BQ15 211 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 LPAR2Q9HBW0 351 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 PLSCR3Q9NRY6 295 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 BOLA1Q9Y3E2 137 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 ODF3BA8MYP8 253 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 ARPC5O15511 151 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 TAGLNQ01995 201 aaKnown RBP16.87■□□□□ 0.29
PNKP-203ENST00000593946 ZNF546Q86UE3 836 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 TGIF2LXQ8IUE1 241 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 PCGF1Q9BSM1 259 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 SLC35D1Q9NTN3 355 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 CACNG5Q9UF02 275 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 HSPB11Q9Y547 144 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 INSIG2Q9Y5U4 225 aa16.87■□□□□ 0.29
PNKP-203ENST00000593946 H0YJW9 148 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 LY6LH3BQJ8 138 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 CRYZL1O95825 349 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 SCGB1D2O95969 90 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 HOXB4P17483 251 aaPredicted RBP16.86■□□□□ 0.29
PNKP-203ENST00000593946 RTL8BQ17RB0 113 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 DHRS7BQ6IAN0 325 aaPredicted RBP16.86■□□□□ 0.29
PNKP-203ENST00000593946 ZFP57Q9NU63 452 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 COA4Q9NYJ1 87 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 OR5AC2Q9NZP5 309 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
PNKP-203ENST00000593946 RNASEK-C17orf49H0YIS7 233 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 K7EPK0 472 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 DEDDO75618 318 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 TOX4O94842 621 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 ARG1P05089 322 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 NQO2P16083 231 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 CXCL2P19875 107 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 NKX2-1P43699 371 aaPredicted RBP16.85■□□□□ 0.29
PNKP-203ENST00000593946 FOXRED2Q8IWF2 684 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 FAM71E2Q8N5Q1 922 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 OR1S1Q8NH92 325 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 TBX15Q96SF7 602 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 POMT1Q9Y6A1 747 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 ITPR2Q14571 2701 aa16.85■□□□□ 0.29
PNKP-203ENST00000593946 ST8SIA3O43173 380 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 SNAPC5O75971 98 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 APOA2P02652 100 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 IGKV1-16P04430 117 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 RRASP10301 218 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 ID3Q02535 119 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 CXorf66Q5JRM2 361 aaPredicted RBP16.84■□□□□ 0.29
PNKP-203ENST00000593946 ITGB1BP2Q9UKP3 347 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 LSM5Q9Y4Y9 91 aaKnown RBP16.84■□□□□ 0.29
PNKP-203ENST00000593946 CR1P17927 2039 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 PAX8Q06710 450 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 MIDNQ504T8 468 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 Q5PR19 223 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 LDLRAD2Q5SZI1 272 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 H2BFWTQ7Z2G1 175 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 C1orf159Q96HA4 380 aa16.84■□□□□ 0.29
PNKP-203ENST00000593946 RCL1Q9Y2P8 373 aaKnown RBP16.84■□□□□ 0.29
PNKP-203ENST00000593946 TXNL1O43396 289 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 RLN2P04090 185 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 GAPDHP04406 335 aaKnown RBP16.83■□□□□ 0.28
PNKP-203ENST00000593946 HTR1DP28221 377 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 ERVK-16P61578 105 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 POU2AF1Q16633 256 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 DCUN1D4Q92564 292 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 MFFQ9GZY8 342 aa16.83■□□□□ 0.28
PNKP-203ENST00000593946 TET2Q6N021 2002 aaPredicted RBP16.82■□□□□ 0.28
PNKP-203ENST00000593946 RNF222A6NCQ9 220 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 FAM90A9PA6NNJ1 464 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 MSMBP08118 114 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 PRSS57Q6UWY2 283 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 PDPNQ86YL7 162 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 DMBX1Q8NFW5 382 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 RPEQ96AT9 228 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 RBMXL1Q96E39 390 aaKnown RBP16.82■□□□□ 0.28
PNKP-203ENST00000593946 RHOVQ96L33 236 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 DPM3Q9P2X0 92 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 PAIP2BQ9ULR5 123 aaKnown RBP16.82■□□□□ 0.28
PNKP-203ENST00000593946 PDZD2O15018 2839 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 IGHV1-3A0A0C4DH29 117 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 LEUTXA8MZ59 168 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 H7C2Y5 167 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 L7N2F9 121 aa16.82■□□□□ 0.28
PNKP-203ENST00000593946 HRASP01112 189 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms