RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF596Q8TC21 504 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 C22orf15Q8WYQ4 148 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 OR2A7Q96R45 310 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 HSD17B10Q99714 261 aaKnown RBP9.63□□□□□ -0.87
DDX39A-219ENST00000592927 TMEM222Q9H0R3 208 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 IFI27L2Q9H2X8 130 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 RANGRFQ9HD47 186 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-219ENST00000592927 RNF150Q9ULK6 438 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 TRIM77I1YAP6 450 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 RAB29O14966 203 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 CDS2O95674 445 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 IFNA21P01568 189 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 IGHV3-7P01780 117 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 RPA2P15927 270 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF134P52741 427 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 PRRX1P54821 245 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 CYCSP99999 105 aaKnown RBP9.62□□□□□ -0.87
DDX39A-219ENST00000592927 SRSF4Q08170 494 aaKnown RBP9.62□□□□□ -0.87
DDX39A-219ENST00000592927 EIF4EBP1Q13541 118 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-219ENST00000592927 CT45A1Q5HYN5 189 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 GSG1LQ6UXU4 331 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 C9orf139Q6ZV77 190 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 BCL6BQ8N143 479 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-219ENST00000592927 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 OR9G1Q8NH87 305 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 CT45A3Q8NHU0 189 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 LEAP2Q969E1 77 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 ABHD14BQ96IU4 210 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 TP53RKQ96S44 253 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 SDHAF2Q9NX18 166 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 FAM96BQ9Y3D0 163 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
DDX39A-219ENST00000592927 ODF3BA8MYP8 253 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 TNFSF12O43508 249 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 SAA4P35542 130 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 GNG10P50151 68 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 C2orf68Q2NKX9 166 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 ZFP69Q49AA0 526 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 UTF1Q5T230 341 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-219ENST00000592927 FAM71F2Q6NXP2 309 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 CD300LFQ8TDQ1 290 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF418Q8TF45 676 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-219ENST00000592927 ADTRPQ96IZ2 230 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 FYTTD1Q96QD9 318 aaKnown RBP9.61□□□□□ -0.87
DDX39A-219ENST00000592927 S1PR3Q99500 378 aa9.61□□□□□ -0.87
DDX39A-219ENST00000592927 RANBP3Q9H6Z4 567 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-219ENST00000592927 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-219ENST00000592927 CMYA5Q8N3K9 4069 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 J3QR06 171 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 SLC31A2O15432 143 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 ATG12O94817 140 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 C1QBP02746 253 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 SERPINE2P07093 398 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 IL3RAP26951 378 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 HTR1DP28221 377 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 DUTP33316 252 aaKnown RBP9.6□□□□□ -0.87
DDX39A-219ENST00000592927 KIR2DS2P43631 304 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 H2BFSP57053 126 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 CD300CQ08708 224 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 FGL1Q08830 312 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 SP6Q3SY56 376 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 RBMS3Q6XE24 437 aaKnown RBP9.6□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF695Q8IW36 515 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 RBPMSQ93062 196 aaKnown RBP9.6□□□□□ -0.87
DDX39A-219ENST00000592927 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 NMES1Q9C002 83 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 PRELID3BQ9Y3B1 194 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 TBL2Q9Y4P3 447 aaKnown RBP9.6□□□□□ -0.87
DDX39A-219ENST00000592927 AMMECR1Q9Y4X0 333 aaPredicted RBP9.6□□□□□ -0.87
DDX39A-219ENST00000592927 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
DDX39A-219ENST00000592927 SAA2-SAA4A0A096LPE2 208 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 A0A1W2PPE3 182 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 C5orf51A6NDU8 294 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 LEUTXA8MZ59 168 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 SNAPC5O75971 98 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 SIX6O95475 246 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 IGLV1-47P01700 117 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 HOXB5P09067 269 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 FBP1P09467 338 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 SAA2P0DJI9 122 aaPredicted RBP9.59□□□□□ -0.87
DDX39A-219ENST00000592927 THBS3P49746 956 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF137PP52743 207 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
DDX39A-219ENST00000592927 HLA-DRB5Q30154 266 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 DEFB112Q30KQ8 113 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 FBLN7Q53RD9 439 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 TMEM268Q5VZI3 342 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
DDX39A-219ENST00000592927 LHFPL4Q7Z7J7 247 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms