RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 PDPNQ86YL7 162 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 ELOVL1Q9BW60 279 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 FOXA2Q9Y261 457 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-210ENST00000590541 PCLOQ9Y6V0 5065 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 PROP1O75360 226 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 DTYMKP23919 212 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 SCAND1P57086 179 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-210ENST00000590541 LINC00476Q8WZB0 136 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-210ENST00000590541 ATG5Q9H1Y0 275 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 HIPK2Q9H2X6 1198 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 FBXL15Q9H469 300 aa13.22□□□□□ -0.29
RETREG3-210ENST00000590541 BET1O15155 118 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-210ENST00000590541 CX3CL1P78423 397 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 CBX3Q13185 183 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 ZNF562Q6V9R5 426 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 RHOVQ96L33 236 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 NUBP2Q9Y5Y2 271 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 TNCP24821 2201 aa13.21□□□□□ -0.29
RETREG3-210ENST00000590541 A0A075B6Q4 140 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 TMEM127O75204 238 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 RRASP10301 218 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 CD40LGP29965 261 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 LGALS7P47929 136 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
RETREG3-210ENST00000590541 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 IGSF11Q5DX21 431 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
RETREG3-210ENST00000590541 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 GINS4Q9BRT9 223 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 DCSTAMPQ9H295 470 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 TUBA4BQ9H853 241 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 METTL1Q9UBP6 276 aaKnown RBP13.2□□□□□ -0.3
RETREG3-210ENST00000590541 A3GALT2U3KPV4 340 aa13.2□□□□□ -0.3
RETREG3-210ENST00000590541 A0A0B4J203 849 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 M0R1X1 148 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
RETREG3-210ENST00000590541 PSG5Q15238 335 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 CDNFQ49AH0 187 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 KCTD21Q4G0X4 260 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 DRAXINQ8NBI3 349 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-210ENST00000590541 ADTRPQ96IZ2 230 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 OR2D2Q9H210 308 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 SLC35D1Q9NTN3 355 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
RETREG3-210ENST00000590541 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
RETREG3-210ENST00000590541 IGKV1-16P04430 117 aa13.18□□□□□ -0.3
RETREG3-210ENST00000590541 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
RETREG3-210ENST00000590541 IL34Q6ZMJ4 242 aa13.18□□□□□ -0.3
RETREG3-210ENST00000590541 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
RETREG3-210ENST00000590541 SDHAF2Q9NX18 166 aa13.18□□□□□ -0.3
RETREG3-210ENST00000590541 ZNF230Q9UIE0 474 aaPredicted RBP13.18□□□□□ -0.3
RETREG3-210ENST00000590541 RRP15Q9Y3B9 282 aaKnown RBP13.18□□□□□ -0.3
RETREG3-210ENST00000590541 H0Y980 276 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 FCN1O00602 326 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 SLC22A5O76082 557 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 SDC2P34741 201 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 TPPP2P59282 170 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 RTL8BQ17RB0 113 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 H1FOOQ8IZA3 346 aaPredicted RBP13.17□□□□□ -0.3
RETREG3-210ENST00000590541 ABHD5Q8WTS1 349 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 TMEM68Q96MH6 324 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 SLA2Q9H6Q3 261 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 ETV7Q9Y603 341 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 CEPT1Q9Y6K0 416 aa13.17□□□□□ -0.3
RETREG3-210ENST00000590541 SLC25A17O43808 307 aa13.16□□□□□ -0.3
RETREG3-210ENST00000590541 TIMM50Q3ZCQ8 353 aa13.16□□□□□ -0.3
RETREG3-210ENST00000590541 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
RETREG3-210ENST00000590541 MAFIPQ8WZ33 124 aa13.16□□□□□ -0.3
RETREG3-210ENST00000590541 FAM103A1Q9BTL3 118 aaKnown RBP13.16□□□□□ -0.3
RETREG3-210ENST00000590541 RANGRFQ9HD47 186 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-210ENST00000590541 A0A0A6YYH2 397 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 SMIM30A4D0T7 59 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 A6NJ64 397 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 H3BUA1 57 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 LY6G6CO95867 125 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 CA2P00918 260 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 CD36P16671 472 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 GNG2P59768 71 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 KLF5Q13887 457 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-210ENST00000590541 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 CNIH2Q6PI25 160 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 OR9G4Q8NGQ1 327 aa13.15□□□□□ -0.3
RETREG3-210ENST00000590541 HARBI1Q96MB7 349 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms