RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	CLLU1	Q5K131	121 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	ABHD12	Q8N2K0	398 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	C11orf42	Q8N5U0	333 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	LY6G5B	Q8NDX9	201 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	TNFRSF14	Q92956	283 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	TMEM186	Q96B77	213 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	CYTL1	Q9NRR1	136 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	ONECUT1	Q9UBC0	465 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	WSB1	Q9Y6I7	421 aa		10.46	□□□□□ -0.74
RAB8A-205	ENST00000589697	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	C22orf46	C9J442	243 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	APOA2	P02652	100 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	GAPDH	P04406	335 aa	Known RBP	10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	ARHGDIB	P52566	201 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	TAGLN	Q01995	201 aa	Known RBP	10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	BAX	Q07812	192 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	BAP18	Q8IXM2	172 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGFBPL1	Q8WX77	278 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	SMIM3	Q9BZL3	60 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	SLC35D1	Q9NTN3	355 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	HSPB7	Q9UBY9	170 aa		10.45	□□□□□ -0.74
RAB8A-205	ENST00000589697	LOC105371242	A0A075B767	164 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGHV2-26	A0A0B4J1V2	119 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGSF23	A1L1A6	192 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	FAM24A	A6NFZ4	105 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	JTB	O76095	146 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	TMEM50A	O95807	157 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	CT45A6	P0DMU7	189 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	CT45A5	P0DMU8	189 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	CT45A7	P0DMV0	189 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	RRAS	P10301	218 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	ZNF137P	P52743	207 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	UBE2K	P61086	200 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	STX12	Q86Y82	276 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	TMEM252	Q8N6L7	170 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	ZNF525	Q8N782	197 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	CLEC7A	Q9BXN2	247 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	MRPL20	Q9BYC9	149 aa	Known RBP	10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	HRAS	P01112	189 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGHV4-39	P01824	125 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	IAPP	P10997	89 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	COX6B1	P14854	86 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	PDLIM4	P50479	330 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	PRRX1	P54821	245 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	TAS2R30	P59541	319 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	RPL7L1	Q6DKI1	246 aa	Known RBP	10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	SSX9	Q7RTT3	188 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	TMEM140	Q9NV12	185 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	CACFD1	Q9UGQ2	172 aa		10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	USP9X	Q93008	2570 aa	Predicted RBP	10.44	□□□□□ -0.74
RAB8A-205	ENST00000589697	MYO18B	Q8IUG5	2567 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697		M0R1W7	72 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGHV2-5	P01817	119 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	PAX9	P55771	341 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	NHLH2	Q02577	135 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	EIF5AL1	Q6IS14	154 aa	Known RBP	10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	CLEC9A	Q6UXN8	241 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	ZNF295-AS1	Q8N0V1	137 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	OR4A16	Q8NH70	328 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	SMIM8	Q96KF7	97 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	RHOV	Q96L33	236 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	AIFM2	Q9BRQ8	373 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	RBKS	Q9H477	322 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	PSENEN	Q9NZ42	101 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	FLNC	Q14315	2725 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	MALRD1	Q5VYJ5	2156 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697	DOCK11	Q5JSL3	2073 aa		10.43	□□□□□ -0.74
RAB8A-205	ENST00000589697		H3BP45	60 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	OR9G9	P0C7N8	305 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	OR2B8P	P59922	312 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	ZNF266	Q14584	549 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	POU2AF1	Q16633	256 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	HLA-DRB5	Q30154	266 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	AARD	Q4LEZ3	155 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	TGIF2LX	Q8IUE1	241 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	VKORC1L1	Q8N0U8	176 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	UBAC2	Q8NBM4	344 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	BEND2	Q8NDZ0	799 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	OR13D1	Q8NGV5	346 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	PCNP	Q8WW12	178 aa	Known RBP	10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	ST6GALNAC6	Q969X2	333 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	BSCL2	Q96G97	398 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	CIB3	Q96Q77	187 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	PCGF1	Q9BSM1	259 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	BPESC1	Q9GZL8	116 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	SLC25A32	Q9H2D1	315 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	DCHS2	Q6V1P9	2916 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	UBR5	O95071	2799 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	LINC00862	A6NCI5	91 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697		H0YJW9	148 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697		H7C2Y5	167 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	TXNL1	O43396	289 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	ENSA	O43768	121 aa	Known RBP	10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	CST7	O76096	145 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	IGLV1-47	P01700	117 aa		10.42	□□□□□ -0.74
RAB8A-205	ENST00000589697	NMB	P08949	121 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms