RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PTPRSQ13332 1948 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 IGKV2-40A0A087WW87 121 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 ZNF879B4DU55 563 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 ATP6V1G2O95670 118 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 IGKV2D-40P01614 121 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 RPL27AP46776 148 aaKnown RBP0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 CTBP2P56545 445 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 CTAG1AP78358 180 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 GNA13Q14344 377 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 SAPCD1Q5SSQ6 148 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 TMEM42Q69YG0 159 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 FAM45BPQ6NSW5 357 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 UNQ6190/PRO20217Q6UXQ8 127 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 FP248Q71RG6 208 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 KTN1-AS1Q86SY8 53 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 SPERTQ8NA61 448 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 C15orf53Q8NAA6 179 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 OR13C8Q8NGS7 320 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 CPNE2Q96FN4 548 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 TREM1Q9NP99 234 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 NRBP2Q9NSY0 501 aa0.87□□□□□ -2.27
SMCHD1-207ENST00000581711 A0A087WUU8 490 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 MKRN2OSH3BPM6 223 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 GOLGA8RI6L899 631 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 KLRC4O43908 158 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 CIAO1O76071 339 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 LINC00614P0C842 121 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 F8A1P23610 371 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 CLDN12P56749 244 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 DNAL1Q4LDG9 190 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 SLC36A1Q7Z2H8 476 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 C17orf78Q8N4C9 275 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 OR52E4Q8NGH9 312 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 OR10D3Q8NH80 312 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 OR5AK3PQ8NH89 298 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 ZNF675Q8TD23 568 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 C19orf60Q96EN9 201 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 C1orf109Q9NX04 203 aa0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 KLK5Q9Y337 293 aaPredicted RBP0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 BAZ2BQ9UIF8 2168 aaKnown RBP0.86□□□□□ -2.27
SMCHD1-207ENST00000581711 TMED7-TICAM2A0A0A6YYA0 188 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 OR6C6A6NF89 314 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 AKR1C3P42330 323 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 HADHBP55084 474 aaKnown RBP0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 TBPL1P62380 186 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 BTN3A2P78410 334 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 HOXC5Q00444 222 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 SLAMF1Q13291 335 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 CDK5R1Q15078 307 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 CLEC12BQ2HXU8 276 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 HLA-DRB5Q30154 266 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 ZNF705AQ6ZN79 300 aaPredicted RBP0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 RBP7Q96R05 134 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 IMMP2LQ96T52 175 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 DOHHQ9BU89 302 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 TMEM222Q9H0R3 208 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 CST9LQ9H4G1 147 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 PCYT1BQ9Y5K3 369 aaPredicted RBP0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 RTTNQ86VV8 2226 aa0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
SMCHD1-207ENST00000581711 KIAA1109Q2LD37 5005 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 DICER1Q9UPY3 1922 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 IGKV3-7A0A075B6H7 116 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 HMSDA8MTL9 139 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 H3BT86 120 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 NDUFS6O75380 124 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 MIPP30301 263 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 CA5AP35218 305 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 PMS2P3Q13401 168 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 SURF2Q15527 256 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 MOGQ16653 247 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 LYZL1Q6UWQ5 148 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 C7orf65Q6ZTY9 151 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 GPHB5Q86YW7 130 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 CRLF3Q8IUI8 442 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 C12orf43Q96C57 262 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 LRRC45Q96CN5 670 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 TMEM109Q9BVC6 243 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 NSRP1Q9H0G5 558 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 CHMP5Q9NZZ3 219 aa0.84□□□□□ -2.27
SMCHD1-207ENST00000581711 ABCC12Q96J65 1359 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 IGHV1-18A0A0C4DH31 117 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 C9JCJ5 164 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 K7ERQ8 282 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 HLA-DQB2P05538 268 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 SNAP25P60880 206 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 EMX1Q04741 257 aaPredicted RBP0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 USF2Q15853 346 aaPredicted RBP0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 MIAQ16674 131 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 LRRC26Q2I0M4 334 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 SLC37A2Q8TED4 501 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 MS4A6EQ96DS6 147 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 TIMM9Q9Y5J7 89 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 HEATR5BQ9P2D3 2071 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 FBN2P35556 2912 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 GREB1Q4ZG55 1949 aa0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 LRPPRCP42704 1394 aaKnown RBP0.83□□□□□ -2.28
SMCHD1-207ENST00000581711 A0A0D9SEW6 157 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 LGALS1P09382 135 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 RPL28P46779 137 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms