RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	PEX14	O75381	377 aa		18.75	■□□□□ 0.59
ERBB2-209	ENST00000578709	CSF1	P09603	554 aa		18.75	■□□□□ 0.59
ERBB2-209	ENST00000578709	PSG5	Q15238	335 aa		18.75	■□□□□ 0.59
ERBB2-209	ENST00000578709	ARRDC1	Q8N5I2	433 aa		18.75	■□□□□ 0.59
ERBB2-209	ENST00000578709	HSPB9	Q9BQS6	159 aa		18.75	■□□□□ 0.59
ERBB2-209	ENST00000578709	LINC01548	A6NM66	108 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	IGLV2-23	P01705	113 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	IFNA6	P05013	189 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	ZNF79	Q15937	498 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	LIN54	Q6MZP7	749 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	STEAP1B	Q6NZ63	245 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	OR4D10	Q8NGI6	311 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	TCTEX1D2	Q8WW35	142 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	HARBI1	Q96MB7	349 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	FBXL15	Q9H469	300 aa		18.74	■□□□□ 0.59
ERBB2-209	ENST00000578709	FCGR3B	O75015	233 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	RAB3D	O95716	219 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	CRYZL1	O95825	349 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	UCP3	P55916	312 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	BRWD1-AS2	P59051	145 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	SPANXN2	Q5MJ10	180 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	AADACL3	Q5VUY0	350 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	LHFPL1	Q86WI0	220 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	FOXRED2	Q8IWF2	684 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	OSR1	Q8TAX0	266 aa	Predicted RBP	18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	GPHA2	Q96T91	129 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	ZNF580	Q9UK33	172 aa		18.73	■□□□□ 0.59
ERBB2-209	ENST00000578709	AP4M1	O00189	453 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	SHOX	O15266	292 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	TNFSF12	O43508	249 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	KIR2DS2	P43631	304 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	MEF2D	Q14814	521 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	PYDC2	Q56P42	97 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	LPCAT3	Q6P1A2	487 aa		18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	METTL1	Q9UBP6	276 aa	Known RBP	18.72	■□□□□ 0.59
ERBB2-209	ENST00000578709	IGHV7-81	A0A0B4J1V7	117 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	ANKRD20A5P	A0PJZ0	165 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	SRRM4	A7MD48	611 aa	Known RBP	18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	GPR31	O00270	319 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	SLC25A17	O43808	307 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	CRYGB	P07316	175 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	CATR1	Q13166	79 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	CENPV	Q7Z7K6	275 aa	Predicted RBP	18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	OR4S2	Q8NH73	311 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	CHPT1	Q8WUD6	406 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	NOL4L	Q96MY1	436 aa	Predicted RBP	18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	THAP7	Q9BT49	309 aa	Predicted RBP	18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	RSRP1	Q9BUV0	290 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	TNC	P24821	2201 aa		18.71	■□□□□ 0.59
ERBB2-209	ENST00000578709	RBFOX2	O43251	390 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	IGF1	P05019	195 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	ZNF735	P0CB33	412 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	AKAIN1	P0CW23	69 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	PLGLA	Q15195	96 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	OR2B11	Q5JQS5	317 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	CMTM1	Q8IZ96	169 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	SLC38A6	Q8IZM9	456 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709		Q8N402	240 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	STPG2	Q8N412	459 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	OR5AU1	Q8NGC0	362 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	TRIM63	Q969Q1	353 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	OR51J1	Q9H342	316 aa		18.7	■□□□□ 0.58
ERBB2-209	ENST00000578709	FCN1	O00602	326 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	FBXO24	O75426	580 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	PGLYRP1	O75594	196 aa	Predicted RBP	18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	UBE2K	P61086	200 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	OR4C16	Q8NGL9	310 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	TERB2	Q8NHR7	220 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	BATF3	Q9NR55	127 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	TPSG1	Q9NRR2	321 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	LINC00527	Q9UJ94	153 aa		18.69	■□□□□ 0.58
ERBB2-209	ENST00000578709	PSMB11	A5LHX3	300 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	CD28	P10747	220 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	CX3CL1	P78423	397 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	VMA21	Q3ZAQ7	101 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	PPP1R27	Q86WC6	154 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	TEX45	Q8NA69	505 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	SRR	Q9GZT4	340 aa		18.68	■□□□□ 0.58
ERBB2-209	ENST00000578709	WNK1	Q9H4A3	2382 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	NDP	Q00604	133 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	CNPY1	Q3B7I2	92 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	FAAP20	Q6NZ36	180 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	C10orf99	Q6UWK7	81 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	ZNF562	Q6V9R5	426 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	SPAG16	Q8N0X2	631 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	C11orf44	Q8N8P7	122 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	OR51H1	Q8NH63	302 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	CD300LF	Q8TDQ1	290 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	GON7	Q9BXV9	100 aa		18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	TET2	Q6N021	2002 aa	Predicted RBP	18.67	■□□□□ 0.58
ERBB2-209	ENST00000578709	DISC1	C4P0D8	188 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	ATP6V0E1	O15342	81 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	RAMP3	O60896	148 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	RLN1	P04808	185 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	CRIP2	P52943	208 aa	Predicted RBP	18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	TCTEX1D4	Q5JR98	221 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	ZNF486	Q96H40	463 aa	Predicted RBP	18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	CLCC1	Q96S66	551 aa		18.66	■□□□□ 0.58
ERBB2-209	ENST00000578709	CA2	P00918	260 aa		18.65	■□□□□ 0.58
ERBB2-209	ENST00000578709	SAA1	P0DJI8	122 aa	Predicted RBP	18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms