RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PPIAL4DF5H284 164 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 DNASE2O00115 360 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-211ENST00000568373 CCL21O00585 134 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 PPIAL4FP0DN26 164 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 NDUFB7P17568 137 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 CHRNB4P30926 498 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 KIR2DS2P43631 304 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 PEA15Q15121 130 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 C1orf229Q6ZS94 237 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-211ENST00000568373 ZNF439Q8NDP4 499 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 DTD1Q8TEA8 209 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 DDB2Q92466 427 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 CIB3Q96Q77 187 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-211ENST00000568373 S1PR3Q99500 378 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 TMEM106BQ9NUM4 274 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 SLC25A10Q9UBX3 287 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-211ENST00000568373 PPIAL4AQ9Y536 164 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 LINC00312Q9Y6C7 94 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 ATRXP46100 2492 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 PKD1L2Q7Z442 2459 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 SAA2-SAA4A0A096LPE2 208 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 A0A1W2PPE3 182 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 FAM90A27PA6NNH2 459 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 NUPL2O15504 423 aaKnown RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 PPIHO43447 177 aaKnown RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 ZG16O60844 167 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 CD3EP07766 207 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 SAA2P0DJI9 122 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 SLC38A11Q08AI6 406 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 DPPA3Q6W0C5 159 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 CCL17Q92583 94 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 OR4C12Q96R67 309 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 EIF5A2Q9GZV4 153 aaKnown RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 MS4A5Q9H3V2 200 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 FBXO7Q9Y3I1 522 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 TSPAN4O14817 238 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 SNAPINO95295 136 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 F12P00748 615 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 OR9G9P0C7N8 305 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 APOBEC3AP31941 199 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 EFNB3Q15768 340 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 LRRC75BQ2VPJ9 315 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 AARDQ4LEZ3 155 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 ARFGEF3Q5TH69 2177 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 ZNF251Q9BRH9 671 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 PBDC1Q9BVG4 233 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 PARD6GQ9BYG4 376 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-211ENST00000568373 NDRG3Q9UGV2 375 aa14.94□□□□□ -0.02
SMPD3-211ENST00000568373 A0A1B0GV50 99 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 FAM74A7A6NL05 159 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 GPR37O15354 613 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 MMP23AO75900 390 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 H2AFB1P0C5Y9 115 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 OR8U8P0C7N1 319 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 MEF2CQ06413 473 aaPredicted RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 FAM74A3Q4VXF1 159 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 SMUG1Q53HV7 270 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 OR8G2PQ6IF36 304 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 SPSB3Q6PJ21 355 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 PSMG3Q9BT73 122 aaPredicted RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 RSG1Q9BU20 258 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 QTRT1Q9BXR0 403 aaKnown RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 RPUSD1Q9UJJ7 312 aaKnown RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 YLPM1P49750 1951 aaKnown RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 ANKHD1Q8IWZ3 2542 aaKnown RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 BTBD17A6NE02 478 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 NQO2P16083 231 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 PPT1P50897 306 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 ERVK-16P61578 105 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 PRAMEF5Q5TYX0 476 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 LYG1Q8N1E2 194 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 OR4S2Q8NH73 311 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 LINC01560Q8TB33 94 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 WDR61Q9GZS3 305 aaKnown RBP14.93□□□□□ -0.02
SMPD3-211ENST00000568373 HIPK2Q9H2X6 1198 aa14.93□□□□□ -0.02
SMPD3-211ENST00000568373 A0A1B0GW64 132 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 CEBPZOSA8MTT3 80 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 OR2B8PP59922 312 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 RPL31P62899 125 aaKnown RBP14.92□□□□□ -0.02
SMPD3-211ENST00000568373 MRPS11P82912 194 aaKnown RBP14.92□□□□□ -0.02
SMPD3-211ENST00000568373 TAGLNQ01995 201 aaKnown RBP14.92□□□□□ -0.02
SMPD3-211ENST00000568373 TLE4Q04727 773 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 SSX9Q7RTT3 188 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 GAL3ST2Q9H3Q3 398 aa14.92□□□□□ -0.02
SMPD3-211ENST00000568373 NBASA2RRP1 2371 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 B9A039 149 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 FCN3O75636 299 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 THBS3P49746 956 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 GNG10P50151 68 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 SPINK9Q5DT21 86 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 SP5Q6BEB4 398 aaPredicted RBP14.91□□□□□ -0.02
SMPD3-211ENST00000568373 ADTRPQ96IZ2 230 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 KPTNQ9Y664 436 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 UBE2L5PA0A1B0GUS4 154 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 PMS2P5A8MQ11 134 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 TNFRSF13BO14836 293 aaPredicted RBP14.91□□□□□ -0.02
SMPD3-211ENST00000568373 GRNP28799 593 aaKnown RBP14.91□□□□□ -0.02
SMPD3-211ENST00000568373 CCL20P78556 96 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 SLC25A48Q6ZT89 311 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms