RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 APCDD1LQ8NCL9 501 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 OR2Z1Q8NG97 314 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 OR51A7Q8NH64 312 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 GRPEL2Q8TAA5 225 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 DYNC2LI1Q8TCX1 351 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 ZNF675Q8TD23 568 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 TNFRSF14Q92956 283 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 YIPF6Q96EC8 236 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 SLC35G5Q96KT7 338 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 TSNAXQ99598 290 aaKnown RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 HDHD2Q9H0R4 259 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 C14orf105Q9NVL8 296 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 MS4A12Q9NXJ0 267 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 STMN3Q9NZ72 180 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 ASB4Q9Y574 426 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 PDE4DIPQ5VU43 2346 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 PTPRSQ13332 1948 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 TICRRQ7Z2Z1 1910 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 BPTFQ12830 3046 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 A0A1B0GVG6 124 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 METTL15A6NJ78 407 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 RGS5O15539 181 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HTR1AP08908 422 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MMP7P09237 267 aaPredicted RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 IFI6P09912 130 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TSPAN19P0C672 248 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CELP19835 753 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 IL3RAP26951 378 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 PSMB6P28072 239 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SDC2P34741 201 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 PRSS3P35030 304 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 P2RY2P41231 377 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CDKN2CP42773 168 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SSR2P43308 183 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 RGS6P49758 472 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 DAPP51397 102 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 XKP51811 444 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 RPL31P62899 125 aaKnown RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 PPP3R1P63098 170 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HBA1P69905 142 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MRPS15P82914 257 aaKnown RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 REEP5Q00765 189 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MLLT11Q13015 90 aaPredicted RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 SLAMF1Q13291 335 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SPCS2Q15005 226 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 DEFB115Q30KQ5 88 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HACD4Q5VWC8 232 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TRIQKQ629K1 86 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TBPL2Q6SJ96 375 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 GID4Q8IVV7 300 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ORMDL3Q8N138 153 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MIR7-3HGQ8N6C7 128 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SLC25A29Q8N8R3 303 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 GDPD1Q8N9F7 314 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 OR52L1Q8NGH7 329 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 PIGXQ8TBF5 258 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HAVCR2Q8TDQ0 301 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 C16orf78Q8WTQ4 265 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ACOT12Q8WYK0 555 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 KCTD7Q96MP8 289 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MGLLQ99685 303 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MAP1LC3CQ9BXW4 147 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CHRNA10Q9GZZ6 450 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SLC22A4Q9H015 551 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 FKBP14Q9NWM8 211 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 NDUFB11Q9NX14 153 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TAS2R7Q9NYW3 318 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 PRRC2BQ5JSZ5 2229 aaKnown RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 PLXND1Q9Y4D7 1925 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 RAB19A4D1S5 217 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CEACAM18A8MTB9 384 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ZNF670-ZNF695F2Z2N8 137 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 J3QRK9 145 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 J3QT63 122 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ZW10O43264 779 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CRTAPO75718 401 aaPredicted RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 CST4P01036 141 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 IGLV3-19P01714 112 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MAS1P04201 325 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HMGN1P05114 100 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 IL3P08700 152 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CD28P10747 220 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CCL5P13501 91 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 NTF3P20783 257 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 F8A1P23610 371 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CMPK1P30085 196 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MPIP34949 423 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CCL23P55773 120 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MLF1P58340 268 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TAS2R41P59536 307 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 VBP1P61758 197 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 NCS1P62166 190 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HSD17B12Q53GQ0 312 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 PRSS54Q6PEW0 395 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 TMEM25Q86YD3 366 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 CLECL1Q8IZS7 167 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 HS3ST5Q8IZT8 346 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ZCCHC24Q8N2G6 241 aaKnown RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 SYS1Q8N2H4 156 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 OR5M1Q8NGP8 315 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms