RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SGPP2Q8IWX5 399 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 ZDHHC22Q8N966 263 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 OR5A1Q8NGJ0 315 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 NEIL3Q8TAT5 605 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 LCN9Q8WX39 176 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 TMEM159Q96B96 161 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 ZNF689Q96CS4 500 aaPredicted RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 OR5AC2Q9NZP5 309 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 COL4A5P29400 1685 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 GAGE12BA1L429 117 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 H7BYZ3 331 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 FXYD1O00168 92 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SULT2B1O00204 365 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 ZFAND5O76080 213 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 CTSDP07339 412 aaPredicted RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 OR4A8P0C604 315 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 HOXA5P20719 270 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SOX3P41225 446 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SELENOPP49908 381 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 FOXA1P55317 472 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 RBM11P57052 281 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 LGALSLQ3ZCW2 172 aaPredicted RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 DGAT2L6Q6ZPD8 337 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 C1QL2Q7Z5L3 287 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 PP6455Q8WZ26 134 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 POP5Q969H6 163 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SIGLEC12Q96PQ1 595 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 PITX2Q99697 317 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 MCHR1Q99705 422 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 LRRC61Q9BV99 259 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SSBP3Q9BWW4 388 aaPredicted RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 MAP6D1Q9H9H5 199 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 NTMQ9P121 344 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 NAT8Q9UHE5 227 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 TBX21Q9UL17 535 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 RLFQ13129 1914 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 IGLV1-36A0A0B4J1U3 117 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 RBMY1BA6NDE4 496 aaKnown RBP3.84□□□□□ -1.8
SMG1-207ENST00000563235 RBMY1EA6NEQ0 496 aaKnown RBP3.84□□□□□ -1.8
SMG1-207ENST00000563235 LINC01619G3V211 115 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 G3V3Q6 166 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 CCDC179H3BU77 68 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 K7ENP7 123 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 NXPH3O95157 252 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 CFDP00746 253 aaPredicted RBP3.84□□□□□ -1.8
SMG1-207ENST00000563235 APODP05090 189 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 RBMY1DP0C7P1 496 aaKnown RBP3.84□□□□□ -1.8
SMG1-207ENST00000563235 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.8
SMG1-207ENST00000563235 CT45A10P0DMU9 189 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 CCL1P22362 96 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 TAS2R20P59543 309 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 PSG9Q00887 426 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 ZNF491Q8N8L2 437 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 DCAF4L2Q8NA75 395 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 ZNF555Q8NEP9 628 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 OR5A2Q8NGI9 324 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 TMEM45AQ9NWC5 275 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 COL1A2P08123 1366 aa3.84□□□□□ -1.8
SMG1-207ENST00000563235 KIAA0100Q14667 2235 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 TRAV8-4A0A0B4J246 113 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 IGKV1D-13A0A0B4J2D9 117 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 PLAC8L1A1L4L8 177 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 IFITM10A6NMD0 228 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 BCL2L11O43521 198 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 IGLC6P0CF74 106 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 IGKV1-13P0DP09 117 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 GADD45AP24522 165 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 TGFBR1P36897 503 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 MYCNOSP40205 109 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 LAMTOR4Q0VGL1 99 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 DAZ2Q13117 558 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 GTF2H5Q6ZYL4 71 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 DAZ4Q86SG3 579 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 RBMXL3Q8N7X1 1067 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 ZNF519Q8TB69 540 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 ADAT3Q96EY9 351 aaPredicted RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 RITA1Q96K30 269 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 DERL1Q9BUN8 251 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 DAZ3Q9NR90 486 aaKnown RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 RBM12B-AS1Q9P1G2 102 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 COQ4Q9Y3A0 265 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 SZT2Q5T011 3432 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 TMED7-TICAM2A0A0A6YYA0 188 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 LOC100131303A0A0U1RQF7 123 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 UNC119BA6NIH7 251 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 ZNF705EA8MWA4 302 aaPredicted RBP3.83□□□□□ -1.8
SMG1-207ENST00000563235 RAMP1O60894 148 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 CD2P06729 351 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 PSMB9P28065 219 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 GABRA3P34903 492 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 TAF6P49848 677 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 HBG1P69891 147 aa3.83□□□□□ -1.8
SMG1-207ENST00000563235 HBG2P69892 147 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms