RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TMEM14EPQ6UXP3 125 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 SSX9Q7RTT3 188 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 CD300LFQ8TDQ1 290 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 DDB2Q92466 427 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 LINC00574Q9H8X3 128 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 TRIM77I1YAP6 450 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 NUPL2O15504 423 aaKnown RBP15.73■□□□□ 0.11
SMPD3-203ENST00000563226 HPRT1P00492 218 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 THNSL2Q86YJ6 484 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 C1orf87Q8N0U7 546 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 PUSL1Q8N0Z8 303 aaKnown RBP15.73■□□□□ 0.11
SMPD3-203ENST00000563226 GNPNAT1Q96EK6 184 aaPredicted RBP15.73■□□□□ 0.11
SMPD3-203ENST00000563226 QTRT1Q9BXR0 403 aaKnown RBP15.73■□□□□ 0.11
SMPD3-203ENST00000563226 RAB9BQ9NP90 201 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 COL6A6A6NMZ7 2263 aa15.73■□□□□ 0.11
SMPD3-203ENST00000563226 TET2Q6N021 2002 aaPredicted RBP15.73■□□□□ 0.11
SMPD3-203ENST00000563226 RBMXL2O75526 392 aaKnown RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 LY6DQ14210 128 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 LYG1Q8N1E2 194 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 DTD1Q8TEA8 209 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 RSG1Q9BU20 258 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 NDRG3Q9UGV2 375 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 CARHSP1Q9Y2V2 147 aaKnown RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 FBXO7Q9Y3I1 522 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 hADV38S2A0JD32 116 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 TNFRSF13BO14836 293 aaPredicted RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 IFNA5P01569 189 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 SFTA3P0C7M3 94 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 CCL3L1P16619 93 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 DVL1P1P54792 670 aaPredicted RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 RPS16P62249 146 aaKnown RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 EFNB3Q15768 340 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 OR8G2PQ6IF36 304 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 SLC25A24Q6NUK1 477 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 S1PR3Q99500 378 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 NKX6-2Q9C056 277 aaPredicted RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 RPUSD1Q9UJJ7 312 aaKnown RBP15.72■□□□□ 0.11
SMPD3-203ENST00000563226 GAB2Q9UQC2 676 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 LINC00312Q9Y6C7 94 aa15.72■□□□□ 0.11
SMPD3-203ENST00000563226 UMAD1C9J7I0 102 aa15.71■□□□□ 0.11
SMPD3-203ENST00000563226 GPR37O15354 613 aa15.71■□□□□ 0.11
SMPD3-203ENST00000563226 LILRB2Q8N423 598 aa15.71■□□□□ 0.11
SMPD3-203ENST00000563226 MS4A5Q9H3V2 200 aa15.71■□□□□ 0.11
SMPD3-203ENST00000563226 CISD1Q9NZ45 108 aaKnown RBP15.71■□□□□ 0.11
SMPD3-203ENST00000563226 CTSZQ9UBR2 303 aa15.71■□□□□ 0.11
SMPD3-203ENST00000563226 ANKHD1Q8IWZ3 2542 aaKnown RBP15.71■□□□□ 0.1
SMPD3-203ENST00000563226 RPL31P62899 125 aaKnown RBP15.71■□□□□ 0.1
SMPD3-203ENST00000563226 HBG1P69891 147 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 HBG2P69892 147 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 CCL20P78556 96 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 MRPS11P82912 194 aaKnown RBP15.71■□□□□ 0.1
SMPD3-203ENST00000563226 SLC38A11Q08AI6 406 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 SEC11CQ9BY50 192 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 PRELID3BQ9Y3B1 194 aa15.71■□□□□ 0.1
SMPD3-203ENST00000563226 TRAV3A0A0B4J244 114 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 FAM74A7A6NL05 159 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 B9A039 149 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 DNASE2O00115 360 aaPredicted RBP15.7■□□□□ 0.1
SMPD3-203ENST00000563226 RBFOX2O43251 390 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMPD3-203ENST00000563226 GUK1Q16774 197 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 FAM74A3Q4VXF1 159 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 SPSB3Q6PJ21 355 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 ZNF383Q8NA42 475 aa15.7■□□□□ 0.1
SMPD3-203ENST00000563226 ITPR1Q14643 2758 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 PPIHO43447 177 aaKnown RBP15.69■□□□□ 0.1
SMPD3-203ENST00000563226 AKR1C8PQ5T2L2 129 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 SVBPQ8N300 66 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.69■□□□□ 0.1
SMPD3-203ENST00000563226 LRBAP50851 2863 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 UBE2L5PA0A1B0GUS4 154 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 CEBPZOSA8MTT3 80 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 LRRC75BQ2VPJ9 315 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 TMEM200BQ69YZ2 307 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 SLC25A48Q6ZT89 311 aaKnown RBP15.69■□□□□ 0.1
SMPD3-203ENST00000563226 COMMD1Q8N668 190 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 ZCCHC14Q8WYQ9 949 aaKnown RBP15.69■□□□□ 0.1
SMPD3-203ENST00000563226 H1FXQ92522 213 aaKnown RBP15.69■□□□□ 0.1
SMPD3-203ENST00000563226 VSIRQ9H7M9 311 aa15.69■□□□□ 0.1
SMPD3-203ENST00000563226 IGHV1-69-2A0A0G2JMI3 117 aa15.68■□□□□ 0.1
SMPD3-203ENST00000563226 LYNX1G3V0Z9 82 aa15.68■□□□□ 0.1
SMPD3-203ENST00000563226 LYNX1P0DP58 116 aa15.68■□□□□ 0.1
SMPD3-203ENST00000563226 MEF2CQ06413 473 aaPredicted RBP15.68■□□□□ 0.1
SMPD3-203ENST00000563226 SCGB1C1Q8TD33 95 aa15.68■□□□□ 0.1
SMPD3-203ENST00000563226 WDR61Q9GZS3 305 aaKnown RBP15.68■□□□□ 0.1
SMPD3-203ENST00000563226 TMEM140Q9NV12 185 aa15.68■□□□□ 0.1
SMPD3-203ENST00000563226 NQO2P16083 231 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 LOXP28300 417 aaPredicted RBP15.67■□□□□ 0.1
SMPD3-203ENST00000563226 KIR2DS2P43631 304 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 PPT1P50897 306 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 AARDQ4LEZ3 155 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 OR4S2Q8NH73 311 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 CA5BP1Q8WTZ4 195 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 ZNF714Q96N38 554 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 EIF5A2Q9GZV4 153 aaKnown RBP15.67■□□□□ 0.1
SMPD3-203ENST00000563226 GAL3ST2Q9H3Q3 398 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 PRORYQ9H606 182 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 DVL1O14640 695 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 NDUFB3O43676 98 aa15.67■□□□□ 0.1
SMPD3-203ENST00000563226 NPBWR1P48145 328 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms