RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RPL26L1Q9UNX3 145 aaKnown RBP1.85□□□□□ -2.11
LINC00557-201ENST00000563184 POLR3HQ9Y535 204 aaPredicted RBP1.85□□□□□ -2.11
LINC00557-201ENST00000563184 KDM5BQ9UGL1 1544 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 PIK3R4Q99570 1358 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 DENND4BO75064 1496 aaPredicted RBP1.84□□□□□ -2.11
LINC00557-201ENST00000563184 A0A087WUU8 490 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 TRGV5A0A0B4J1U4 118 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 A0A1B0GVG6 124 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 GOLGA8KD6RF30 607 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 GOLGA8MH3BSY2 632 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 CD40LGP29965 261 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 GABRA2P47869 451 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 SAPCD1Q5SSQ6 148 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 GPHB5Q86YW7 130 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 KCTD7Q96MP8 289 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 DHRS9Q9BPW9 319 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 PTPRBP23467 1997 aa1.84□□□□□ -2.11
LINC00557-201ENST00000563184 CCDC88CQ9P219 2028 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 TMSB15BA0A087X1C1 80 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 C5orf49A4QMS7 147 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 HLA-DRAP01903 254 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 CTBP2P56545 445 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 ZNF791Q3KP31 576 aaPredicted RBP1.83□□□□□ -2.12
LINC00557-201ENST00000563184 HSP90B2PQ58FF3 399 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 PABPC1L2AQ5JQF8 200 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 NAA40Q86UY6 237 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 EEF1AKMT1Q8WVE0 214 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 NMNAT3Q96T66 252 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 TTTY13Q9BZ97 58 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 RTTNQ86VV8 2226 aa1.83□□□□□ -2.12
LINC00557-201ENST00000563184 MALRD1Q5VYJ5 2156 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 REREQ9P2R6 1566 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 TRAV41A0A0B4J266 112 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 C1orf232A0A0U1RR37 186 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 ZNF705FA8MVS1 300 aaPredicted RBP1.82□□□□□ -2.12
LINC00557-201ENST00000563184 BHLHE40O14503 412 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 NPYP01303 97 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 HLA-DQB2P05538 268 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 BPGMP07738 259 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 RAP1GDS1P52306 607 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 TBPL1P62380 186 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 HOXC5Q00444 222 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 UAP1Q16222 522 aaPredicted RBP1.82□□□□□ -2.12
LINC00557-201ENST00000563184 KRTAP21-3Q3LHN1 58 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 OR5J2Q8NH18 312 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 TMEM222Q9H0R3 208 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 HES4Q9HCC6 221 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 HHLA3Q9XRX5 114 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 ZNF532Q9HCE3 1301 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 ABCC12Q96J65 1359 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 SIPA1L1O43166 1804 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 RGS12O14924 1447 aa1.82□□□□□ -2.12
LINC00557-201ENST00000563184 MED13Q9UHV7 2174 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 RFPL4AA6NLU0 287 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 C9JCJ5 164 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 RFPL4AL1F8VTS6 287 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 UCHL1P09936 223 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 RPL27AP46776 148 aaKnown RBP1.81□□□□□ -2.12
LINC00557-201ENST00000563184 EMP2P54851 167 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 GNA12Q03113 381 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 DMTNQ08495 405 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 PLPPR5Q32ZL2 321 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 SLC35E3Q7Z769 313 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 TMEM156Q8N614 296 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 LHFPL5Q8TAF8 219 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 ANKRD36BP1Q96IX9 119 aa1.81□□□□□ -2.12
LINC00557-201ENST00000563184 COL4A1P02462 1669 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 SIGLEC16A6NMB1 481 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 IDH3GP51553 393 aaPredicted RBP1.8□□□□□ -2.12
LINC00557-201ENST00000563184 FKBP1AP62942 108 aaKnown RBP1.8□□□□□ -2.12
LINC00557-201ENST00000563184 ERHP84090 104 aaKnown RBP1.8□□□□□ -2.12
LINC00557-201ENST00000563184 N4BP2L1Q5TBK1 243 aaPredicted RBP1.8□□□□□ -2.12
LINC00557-201ENST00000563184 Q8N402 240 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 CMTM5Q96DZ9 223 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 LLPHQ9BRT6 129 aaKnown RBP1.8□□□□□ -2.12
LINC00557-201ENST00000563184 BABAM2Q9NXR7 383 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 TAAR3PQ9P1P4 343 aa1.8□□□□□ -2.12
LINC00557-201ENST00000563184 RP1L1Q8IWN7 2480 aaPredicted RBP1.79□□□□□ -2.12
LINC00557-201ENST00000563184 TXNDC9O14530 226 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 REG1AP05451 166 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 COX5BP10606 129 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 CCR2P41597 374 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 MED21Q13503 144 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 PPP1R1AQ13522 171 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 SBSNQ6UWP8 590 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 FAM9CQ8IZT9 166 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 OR51T1Q8NGJ9 327 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 OR13C8Q8NGS7 320 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 RAB2BQ8WUD1 216 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 C12orf43Q96C57 262 aaKnown RBP1.79□□□□□ -2.12
LINC00557-201ENST00000563184 RBM7Q9Y580 266 aaKnown RBP1.79□□□□□ -2.12
LINC00557-201ENST00000563184 GRIN2BQ13224 1484 aa1.79□□□□□ -2.12
LINC00557-201ENST00000563184 PTPRSQ13332 1948 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 KIF15Q9NS87 1388 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 APOMO95445 188 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 YEATS4O95619 227 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 TYMSP04818 313 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 GPX1P07203 203 aa1.78□□□□□ -2.12
LINC00557-201ENST00000563184 CST9Q5W186 159 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms