RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DAZAP2Q15038 168 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 CORO2AQ92828 525 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 POM121L2Q96KW2 1035 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 FGF23Q9GZV9 251 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 PSENENQ9NZ42 101 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 HSPB7Q9UBY9 170 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 TNRC6AQ8NDV7 1962 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 A0A1B0GUS0 222 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 H3BP45 60 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 SYNGR2O43760 224 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 TUSC2O75896 110 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 ARG2P78540 354 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 TESK1Q15569 626 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 SPATA45Q537H7 98 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNF766Q5HY98 468 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 RNFT1Q5M7Z0 435 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 ETFRF1Q6IPR1 90 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 MRPL21Q7Z2W9 205 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 Q8NFD4 153 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 SPRR3Q9UBC9 169 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 TP53TG3Q9ULZ0 132 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 MRPS16Q9Y3D3 137 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 TRGV5A0A0B4J1U4 118 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 IGHV2-70DA0A0C4DH43 119 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 LRP5LA4QPB2 252 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 SERF1AO75920 110 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 IGLC3P0DOY3 106 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 LINC00310P59036 64 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 PDCD1Q15116 288 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 TXN2Q99757 166 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
RABGGTA-220ENST00000560998 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 NXPH3O95157 252 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 CEACAM8P31997 349 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 PLP2Q04941 152 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 Q6ZN92 141 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 Q6ZPA2 131 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 SIGLECL1Q8N7X8 197 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNF709Q8N972 641 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 OR5B3Q8NH48 314 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 LOC105371242A0A075B767 164 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 KIR2DS1A0A191URI9 304 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 HYPMO75409 117 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 NGFP01138 241 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 F2RP25116 425 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 KIR2DS4P43632 304 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 KIR2DS1Q14954 304 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 LRP11Q86VZ4 500 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 SAXO1Q8IYX7 474 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 LYG1Q8N1E2 194 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 TMEM178AQ8NBL3 297 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 OR4C12Q96R67 309 aa11.74□□□□□ -0.53
RABGGTA-220ENST00000560998 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 IGKV1D-33P01593 117 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 IGKV1-33P01594 117 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 REG1AP05451 166 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 BCL3P20749 454 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 GPM6AP51674 278 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 FBLN7Q53RD9 439 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 TMPRSS7Q7RTY8 843 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 BATF2Q8N1L9 274 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 TCTEX1D1Q8N7M0 179 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 Q8N976 141 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 OR1L6Q8NGR2 347 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms