RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
HERC1-211ENST00000560983 OR2AK2Q8NG84 335 aa2.55□□□□□ -2
HERC1-211ENST00000560983 OR10V1Q8NGI7 309 aa2.55□□□□□ -2
HERC1-211ENST00000560983 OR6K6Q8NGW6 343 aa2.55□□□□□ -2
HERC1-211ENST00000560983 OR6N2Q8NGY6 317 aa2.55□□□□□ -2
HERC1-211ENST00000560983 OR1L1Q8NH94 360 aa2.55□□□□□ -2
HERC1-211ENST00000560983 GRPEL2Q8TAA5 225 aa2.55□□□□□ -2
HERC1-211ENST00000560983 THEM6Q8WUY1 208 aa2.55□□□□□ -2
HERC1-211ENST00000560983 TMEM190Q8WZ59 177 aa2.55□□□□□ -2
HERC1-211ENST00000560983 GHSRQ92847 366 aa2.55□□□□□ -2
HERC1-211ENST00000560983 ARL11Q969Q4 196 aa2.55□□□□□ -2
HERC1-211ENST00000560983 FAM46BQ96A09 425 aa2.55□□□□□ -2
HERC1-211ENST00000560983 TMEM68Q96MH6 324 aa2.55□□□□□ -2
HERC1-211ENST00000560983 TMEM70Q9BUB7 260 aa2.55□□□□□ -2
HERC1-211ENST00000560983 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
HERC1-211ENST00000560983 C6orf62Q9GZU0 229 aaPredicted RBP2.55□□□□□ -2
HERC1-211ENST00000560983 Q9H8V8 135 aa2.55□□□□□ -2
HERC1-211ENST00000560983 MRPL27Q9P0M9 148 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 RCC2Q9P258 522 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 METTL1Q9UBP6 276 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 NUFIP1Q9UHK0 495 aaKnown RBP2.55□□□□□ -2
HERC1-211ENST00000560983 TMED3Q9Y3Q3 217 aa2.55□□□□□ -2
HERC1-211ENST00000560983 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
HERC1-211ENST00000560983 FAM223BA6NKX1 122 aa2.54□□□□□ -2
HERC1-211ENST00000560983 H0YJX3 145 aa2.54□□□□□ -2
HERC1-211ENST00000560983 SLC22A1O15245 554 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ORC5O43913 435 aa2.54□□□□□ -2
HERC1-211ENST00000560983 SELENOFO60613 162 aa2.54□□□□□ -2
HERC1-211ENST00000560983 SNNO75324 88 aaPredicted RBP2.54□□□□□ -2
HERC1-211ENST00000560983 E2F6O75461 281 aa2.54□□□□□ -2
HERC1-211ENST00000560983 H1F0P07305 194 aaKnown RBP2.54□□□□□ -2
HERC1-211ENST00000560983 CT45A6P0DMU7 189 aa2.54□□□□□ -2
HERC1-211ENST00000560983 CT45A5P0DMU8 189 aa2.54□□□□□ -2
HERC1-211ENST00000560983 CT45A7P0DMV0 189 aa2.54□□□□□ -2
HERC1-211ENST00000560983 MYOD1P15172 320 aa2.54□□□□□ -2
HERC1-211ENST00000560983 CCL1P22362 96 aa2.54□□□□□ -2
HERC1-211ENST00000560983 LGALS7P47929 136 aa2.54□□□□□ -2
HERC1-211ENST00000560983 GSSP48637 474 aa2.54□□□□□ -2
HERC1-211ENST00000560983 HOXA1P49639 335 aaPredicted RBP2.54□□□□□ -2
HERC1-211ENST00000560983 RBP2P50120 134 aa2.54□□□□□ -2
HERC1-211ENST00000560983 PLGLAQ15195 96 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ATAD3CQ5T2N8 411 aa2.54□□□□□ -2
HERC1-211ENST00000560983 DEGS2Q6QHC5 323 aa2.54□□□□□ -2
HERC1-211ENST00000560983 FAM223AQ8IWN6 122 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ELMOD2Q8IZ81 293 aa2.54□□□□□ -2
HERC1-211ENST00000560983 OR8D4Q8NGM9 314 aa2.54□□□□□ -2
HERC1-211ENST00000560983 CNIH3Q8TBE1 160 aa2.54□□□□□ -2
HERC1-211ENST00000560983 MARC2Q969Z3 335 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ASB9Q96DX5 294 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ATG101Q9BSB4 218 aa2.54□□□□□ -2
HERC1-211ENST00000560983 Q9H3A6 140 aa2.54□□□□□ -2
HERC1-211ENST00000560983 MED20Q9H944 212 aa2.54□□□□□ -2
HERC1-211ENST00000560983 Q9N2K0 584 aa2.54□□□□□ -2
HERC1-211ENST00000560983 SLC2A9Q9NRM0 540 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ZNF581Q9P0T4 197 aa2.54□□□□□ -2
HERC1-211ENST00000560983 ENPP4Q9Y6X5 453 aa2.54□□□□□ -2
HERC1-211ENST00000560983 NACAE9PAV3 2078 aa2.54□□□□□ -2
HERC1-211ENST00000560983 A0A087WTM6 91 aa2.53□□□□□ -2
HERC1-211ENST00000560983 OR4C46A6NHA9 309 aa2.53□□□□□ -2
HERC1-211ENST00000560983 H0YJW9 148 aa2.53□□□□□ -2
HERC1-211ENST00000560983 MT-ND4P03905 459 aa2.53□□□□□ -2
HERC1-211ENST00000560983 CRYGBP07316 175 aa2.53□□□□□ -2
HERC1-211ENST00000560983 APELAP0DMC3 54 aa2.53□□□□□ -2
HERC1-211ENST00000560983 EPHA2P29317 976 aa2.53□□□□□ -2
HERC1-211ENST00000560983 MAP2K4P45985 399 aa2.53□□□□□ -2
HERC1-211ENST00000560983 MTCP1P56278 107 aa2.53□□□□□ -2
HERC1-211ENST00000560983 USF2Q15853 346 aaPredicted RBP2.53□□□□□ -2
HERC1-211ENST00000560983 C15orf32Q32M92 178 aa2.53□□□□□ -2
HERC1-211ENST00000560983 FAM106AQ4KMX7 169 aa2.53□□□□□ -2
HERC1-211ENST00000560983 SLC22A6Q4U2R8 563 aa2.53□□□□□ -2
HERC1-211ENST00000560983 MORN2Q502X0 79 aa2.53□□□□□ -2
HERC1-211ENST00000560983 LRRC23Q53EV4 343 aaPredicted RBP2.53□□□□□ -2
HERC1-211ENST00000560983 AGKQ53H12 422 aa2.53□□□□□ -2
HERC1-211ENST00000560983 PAN3Q58A45 887 aaKnown RBP2.53□□□□□ -2
HERC1-211ENST00000560983 LIPKQ5VXJ0 399 aa2.53□□□□□ -2
HERC1-211ENST00000560983 OR4A47Q6IF82 309 aa2.53□□□□□ -2
HERC1-211ENST00000560983 EPGNQ6UW88 154 aa2.53□□□□□ -2
HERC1-211ENST00000560983 GLDNQ6ZMI3 551 aaPredicted RBP2.53□□□□□ -2
HERC1-211ENST00000560983 CCDC107Q8WV48 283 aa2.53□□□□□ -2
HERC1-211ENST00000560983 RNF125Q96EQ8 232 aa2.53□□□□□ -2
HERC1-211ENST00000560983 BORCS8Q96FH0 119 aa2.53□□□□□ -2
HERC1-211ENST00000560983 RNF5Q99942 180 aa2.53□□□□□ -2
HERC1-211ENST00000560983 PYGO2Q9BRQ0 406 aa2.53□□□□□ -2
HERC1-211ENST00000560983 CHST5Q9GZS9 411 aa2.53□□□□□ -2
HERC1-211ENST00000560983 PPCSQ9HAB8 311 aa2.53□□□□□ -2
HERC1-211ENST00000560983 RHOFQ9HBH0 211 aa2.53□□□□□ -2
HERC1-211ENST00000560983 FAM118AQ9NWS6 357 aa2.53□□□□□ -2
HERC1-211ENST00000560983 COA4Q9NYJ1 87 aa2.53□□□□□ -2
HERC1-211ENST00000560983 IL20Q9NYY1 176 aa2.53□□□□□ -2
HERC1-211ENST00000560983 TBC1D24Q9ULP9 559 aa2.53□□□□□ -2
HERC1-211ENST00000560983 OR2W1Q9Y3N9 320 aa2.53□□□□□ -2
HERC1-211ENST00000560983 MAGEB4O15481 346 aaPredicted RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 SULT1B1O43704 296 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 MRPS14O60783 128 aaKnown RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 GATBO75879 557 aaKnown RBP2.52□□□□□ -2.01
HERC1-211ENST00000560983 OR2J3O76001 311 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 DIRAS1O95057 198 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 IGLV2-23P01705 113 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 IGHV3-23P01764 117 aa2.52□□□□□ -2.01
HERC1-211ENST00000560983 IGKV1-16P04430 117 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms