RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PPP1R1CQ8WVI7 109 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 RRNAD1Q96FB5 475 aaKnown RBP7□□□□□ -1.29
TRAF3-209ENST00000560463 LPAR2Q9HBW0 351 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 MMP26Q9NRE1 261 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 COA4Q9NYJ1 87 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 CACFD1Q9UGQ2 172 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 TBL2Q9Y4P3 447 aaKnown RBP7□□□□□ -1.29
TRAF3-209ENST00000560463 MMP24Q9Y5R2 645 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 MINOS1-NBL1R4GNA1 71 aa7□□□□□ -1.29
TRAF3-209ENST00000560463 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 ZANQ9Y493 2812 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 MARCH11A6NNE9 402 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 HMSDA8MTL9 139 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 MPTX1A8MV57 137 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 OOSP1A8MZH6 123 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 LY6LH3BQJ8 138 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 MPC2O95563 127 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 HRASP01112 189 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 RLN2P04090 185 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 ARG1P05089 322 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 SLC25A4P12235 298 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 NQO2P16083 231 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 HOXB4P17483 251 aaPredicted RBP6.99□□□□□ -1.29
TRAF3-209ENST00000560463 COX7A1P24310 79 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 EIF2B2P49770 351 aaKnown RBP6.99□□□□□ -1.29
TRAF3-209ENST00000560463 RAB13P51153 203 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 LGALS4P56470 323 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 HIST2H2BCQ6DN03 193 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 THOC7Q6I9Y2 204 aaKnown RBP6.99□□□□□ -1.29
TRAF3-209ENST00000560463 HCP5Q6MZN7 132 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 PDPNQ86YL7 162 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 LINC01356Q8N9X3 169 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 DRAXINQ8NBI3 349 aaPredicted RBP6.99□□□□□ -1.29
TRAF3-209ENST00000560463 OR4C13Q8NGP0 309 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 OSR1Q8TAX0 266 aaPredicted RBP6.99□□□□□ -1.29
TRAF3-209ENST00000560463 THAP6Q8TBB0 222 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 FOXC2Q99958 501 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 NABP2Q9BQ15 211 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 REG4Q9BYZ8 158 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 SIRT7Q9NRC8 400 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 SLC35D1Q9NTN3 355 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 DPM3Q9P2X0 92 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 CCDC168Q8NDH2 2452 aa6.99□□□□□ -1.29
TRAF3-209ENST00000560463 FLNAP21333 2647 aaKnown RBP6.98□□□□□ -1.29
TRAF3-209ENST00000560463 IGHV1-3A0A0C4DH29 117 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 FAM90A26D6RGX4 464 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 G3V3Q6 166 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 RNASEK-C17orf49H0YIS7 233 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 S1PR2O95136 353 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 KRASP01116 189 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 IGKV1-5P01602 117 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 ERVK-16P61578 105 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 SMCO1Q147U7 214 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 TMEM177Q53S58 311 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 OR2B11Q5JQS5 317 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 TPTE2P1Q5T6R2 138 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 CCDC144NLQ6NUI1 221 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 C11orf87Q6NUJ2 197 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 PRSS54Q6PEW0 395 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 TMEM65Q6PI78 240 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 H2BFWTQ7Z2G1 175 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 OR8H3Q8N146 312 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 OR4D5Q8NGN0 318 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 LHX4Q969G2 390 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 RPEQ96AT9 228 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 GPR146Q96CH1 333 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 R3HDM4Q96D70 268 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 WDR89Q96FK6 387 aaPredicted RBP6.98□□□□□ -1.29
TRAF3-209ENST00000560463 TBX15Q96SF7 602 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
TRAF3-209ENST00000560463 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 ZNRD1Q9P1U0 126 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 WASHC3Q9Y3C0 194 aa6.98□□□□□ -1.29
TRAF3-209ENST00000560463 NAV3Q8IVL0 2385 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 TRAV14DV4A0A0A6YYC5 116 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 RNF223E7ERA6 249 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 H0YJW9 148 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 SMLR1H3BR10 107 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 H7C2Y5 167 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 J3QLI3 93 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 ST8SIA3O43173 380 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 PITX3O75364 302 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 CRYZL1O95825 349 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 P0C879 139 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 LYL1P12980 280 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 G6PCP35575 357 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 NKX2-1P43699 371 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-209ENST00000560463 LGALS7P47929 136 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 LINC00205P59089 165 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 ID3Q02535 119 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 KLRD1Q13241 179 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 RAB32Q13637 225 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 HABP2Q14520 560 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-209ENST00000560463 MIDNQ504T8 468 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 DMBX1Q8NFW5 382 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 OR1S1Q8NH92 325 aa6.97□□□□□ -1.29
TRAF3-209ENST00000560463 FLYWCH2Q96CP2 140 aaKnown RBP6.97□□□□□ -1.29
TRAF3-209ENST00000560463 MALSU1Q96EH3 234 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms