RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 LGALS7P47929 136 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 TAS2R46P59540 309 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 SLC35B1P78383 322 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 DYRK1AQ13627 763 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 MSMO1Q15800 293 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 BVESQ8NE79 360 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 RCC1LQ96I51 464 aaKnown RBP12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 FBXL15Q9H469 300 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 IGHV7-81A0A0B4J1V7 117 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 LINC00473A8K010 186 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 RFX2P48378 723 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 CBX3Q13185 183 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 PSG5Q15238 335 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 RTL8BQ17RB0 113 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 OR5H2Q8NGV7 314 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 SLIRPQ9GZT3 109 aaKnown RBP12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 OR51J1Q9H342 316 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 EHFQ9NZC4 300 aa12.33□□□□□ -0.44
CHMP1A-206ENST00000549139 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 TCRBV4S1A1TA0A5B7 111 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 PMP2P02689 132 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 RCVRNP35243 200 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 EIF4EBP1Q13541 118 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 PLGLAQ15195 96 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF66Q6ZN08 573 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 LAX1Q8IWV1 398 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 ABHD1Q96SE0 405 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 CCL28Q9NRJ3 127 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-206ENST00000549139 DNAH1Q9P2D7 4330 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF701M0R085 212 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 FCN1O00602 326 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 SHOXO15266 292 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 HLA-DMAP28067 261 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 RPL30P62888 115 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 TEX38Q6PEX7 206 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 RSL24D1Q9UHA3 163 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-206ENST00000549139 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 CRYGBP07316 175 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 PF4V1P10720 104 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 VDAC1P21796 283 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 HRH1P35367 487 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 FXYD4P59646 89 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 HERV-K104P61576 105 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 CX3CL1P78423 397 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 KCTD9Q7L273 389 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 FCAMRQ8WWV6 532 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 MOB3AQ96BX8 217 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 ZNF2Q9BSG1 426 aaPredicted RBP12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 C6orf62Q9GZU0 229 aaPredicted RBP12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 KLK11Q9UBX7 282 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 MTFP1Q9UDX5 166 aa12.3□□□□□ -0.44
CHMP1A-206ENST00000549139 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 ATP6V0E1O15342 81 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 SLC25A17O43808 307 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 FCGR3BO75015 233 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 CRYZL1O95825 349 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 ELANEP08246 267 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 CRIP2P52943 208 aaPredicted RBP12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 CFHR3Q02985 330 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 PYHIN1Q6K0P9 492 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 OR52I2Q8NH67 350 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 MCFD2Q8NI22 146 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 CLCC1Q96S66 551 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
CHMP1A-206ENST00000549139 TNCP24821 2201 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms