RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 RTL8BQ17RB0 113 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 BVESQ8NE79 360 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 OR5T1Q8NG75 326 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 C5orf30Q96GV9 206 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 OR4C12Q96R67 309 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 GINS4Q9BRT9 223 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
COL2A1-209ENST00000546974 ZNF355PQ9NSJ1 428 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 RBM7Q9Y580 266 aaKnown RBP11.06□□□□□ -0.64
COL2A1-209ENST00000546974 A0A0B4J203 849 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 C13orf42A0A1B0GVH6 325 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 SRRM4A7MD48 611 aaKnown RBP11.05□□□□□ -0.64
COL2A1-209ENST00000546974 DTYMKP23919 212 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 NR2C2APQ86WQ0 139 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 ADTRPQ96IZ2 230 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 LYSTQ99698 3801 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
COL2A1-209ENST00000546974 ZP3P21754 424 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
COL2A1-209ENST00000546974 UBE2UQ5VVX9 321 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
COL2A1-209ENST00000546974 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 DDB2Q92466 427 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 TINAGL1Q9GZM7 467 aaPredicted RBP11.04□□□□□ -0.64
COL2A1-209ENST00000546974 ATG5Q9H1Y0 275 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
COL2A1-209ENST00000546974 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 AADACP22760 399 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 FGF9P31371 208 aaPredicted RBP11.03□□□□□ -0.64
COL2A1-209ENST00000546974 UBE2KP61086 200 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 CDNFQ49AH0 187 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
COL2A1-209ENST00000546974 TXNL4BQ9NX01 149 aaKnown RBP11.03□□□□□ -0.64
COL2A1-209ENST00000546974 ELF5Q9UKW6 265 aaPredicted RBP11.03□□□□□ -0.64
COL2A1-209ENST00000546974 LINC00473A8K010 186 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 IGLV1-51P01701 117 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 CTXN2P0C2S0 81 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
COL2A1-209ENST00000546974 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 HACD4Q5VWC8 232 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 TPRA1Q86W33 373 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 SPARTQ8N0X7 666 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 ZNF645Q8N7E2 425 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.65
COL2A1-209ENST00000546974 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 DCSTAMPQ9H295 470 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 SACSQ9NZJ4 4579 aa11.02□□□□□ -0.65
COL2A1-209ENST00000546974 SMIM30A4D0T7 59 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 ANKRD34BA5PLL1 514 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 MSGN1A6NI15 193 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 TRIM64CA6NLI5 447 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 C3orf84H3BNL1 204 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 SCGNO76038 276 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 CRYZL1O95825 349 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 FRMD6-AS1P0C7T7 363 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 PSMB9P28065 219 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 PRSS8Q16651 343 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 ZNF343Q6P1L6 599 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 ANKRD13BQ86YJ7 626 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 FCGR1BQ92637 280 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 PHB2Q99623 299 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 ST6GALNAC5Q9BVH7 336 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 YTHDF1Q9BYJ9 559 aaKnown RBP11.01□□□□□ -0.65
COL2A1-209ENST00000546974 COA4Q9NYJ1 87 aa11.01□□□□□ -0.65
COL2A1-209ENST00000546974 PEF1Q9UBV8 284 aaKnown RBP11.01□□□□□ -0.65
COL2A1-209ENST00000546974 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 SLC22A5O76082 557 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 HLA-DQB1P01920 261 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 DYRK1AQ13627 763 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 TNXAQ16473 311 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 CNIH2Q6PI25 160 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
COL2A1-209ENST00000546974 OR9G4Q8NGQ1 327 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 SRSF12Q8WXF0 261 aaKnown RBP11□□□□□ -0.65
COL2A1-209ENST00000546974 RCHY1Q96PM5 261 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 SSR3Q9UNL2 185 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 OR2W1Q9Y3N9 320 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 STARD9Q9P2P6 4700 aa11□□□□□ -0.65
COL2A1-209ENST00000546974 J3QRK9 145 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 CREBL2O60519 120 aaPredicted RBP10.99□□□□□ -0.65
COL2A1-209ENST00000546974 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 APELAP0DMC3 54 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 CD36P16671 472 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
COL2A1-209ENST00000546974 CDK10Q15131 360 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 TATDN3Q17R31 274 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 IL34Q6ZMJ4 242 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 IDO2Q6ZQW0 420 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 HAPLN4Q86UW8 402 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 Q8N1Y9 231 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 Q9H521 79 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 ZMAT4Q9H898 229 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 ZNF430Q9H8G1 570 aaPredicted RBP10.99□□□□□ -0.65
COL2A1-209ENST00000546974 DAPK2Q9UIK4 370 aa10.99□□□□□ -0.65
COL2A1-209ENST00000546974 RBMX2Q9Y388 322 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms