RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 GHRLQ9UBU3 117 aa4.04□□□□□ -1.76
SNHG1-207ENST00000537965 PEF1Q9UBV8 284 aaKnown RBP4.04□□□□□ -1.76
SNHG1-207ENST00000537965 MGAT4AQ9UM21 535 aa4.04□□□□□ -1.76
SNHG1-207ENST00000537965 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ERICH4A6NGS2 130 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 E9PI62 339 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 H0YJW9 148 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 H3BNX3 289 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 RAB27BO00194 218 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 FCN1O00602 326 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 OGG1O15527 345 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 SPRY2O43597 315 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 PDCD6O75340 191 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 CRTAPO75718 401 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ATP5HO75947 161 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 CA2P00918 260 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 APOA2P02652 100 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ALPLP05186 524 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 UBBP0CG47 229 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 IGFBP3P17936 291 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 BTF3P20290 206 aaKnown RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 DCKP27707 260 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 RANBP1P43487 201 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 OR3A3P47888 321 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ALDH3A2P51648 485 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 GTF2A1P52655 376 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 SYNJ2BPP57105 145 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 CD81P60033 236 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 NDPQ00604 133 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 Q499Y3 187 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 YIF1BQ5BJH7 314 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 GLT8D1Q68CQ7 371 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 DMKNQ6E0U4 476 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ZNF343Q6P1L6 599 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 GLIPR1L1Q6UWM5 242 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 LINC00322Q6ZN03 302 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 MOB1BQ7L9L4 216 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 PDPNQ86YL7 162 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 NKAIN3Q8N8D7 197 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 POC5Q8NA72 575 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 OR52I1Q8NGK6 324 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 RHOXF1Q8NHV9 184 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 MRPL30Q8TCC3 161 aaKnown RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 CASTOR1Q8WTX7 329 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 IL1F10Q8WWZ1 152 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 SMIM19Q96E16 107 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 CLCC1Q96S66 551 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 UQCC2Q9BRT2 126 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 BABAM2Q9NXR7 383 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 ZNF221Q9UK13 617 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 FBXO7Q9Y3I1 522 aa4.03□□□□□ -1.76
SNHG1-207ENST00000537965 DYNC2H1Q8NCM8 4307 aaKnown RBP4.03□□□□□ -1.76
SNHG1-207ENST00000537965 TRBV5-5A0A0J9YX44 114 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 A0A1W2PP11 408 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 RBMY1BA6NDE4 496 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 RBMY1EA6NEQ0 496 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 SAC3D1A6NKF1 404 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CIB2O75838 187 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 NDUFB8O95169 186 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 LY6G6CO95867 125 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CSN3P07498 182 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 RBMY1DP0C7P1 496 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CT45A6P0DMU7 189 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CT45A5P0DMU8 189 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CT45A7P0DMV0 189 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 MYL12AP19105 171 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 ZBTB25P24278 435 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 MAPK3P27361 379 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CEACAM6P40199 344 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 TAS2R43P59537 309 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 TPBGQ13641 420 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 GNMTQ14749 295 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 PSG5Q15238 335 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 HMGN3Q15651 99 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 ANKRD55Q3KP44 614 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 TTC23Q5W5X9 447 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 IL34Q6ZMJ4 242 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 SLC16A13Q7RTY0 426 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 HAPLN4Q86UW8 402 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 OR5T1Q8NG75 326 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 GRPEL2Q8TAA5 225 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 DYNLRB2Q8TF09 96 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 FAM46BQ96A09 425 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 FAM103A1Q9BTL3 118 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 ST6GALNAC5Q9BVH7 336 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 IFI27L2Q9H2X8 130 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 BANF2Q9H503 90 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 PLEKHA3Q9HB20 300 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 CHMP1AQ9HD42 196 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 AMBNQ9NP70 447 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 FGF20Q9NP95 211 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 COA4Q9NYJ1 87 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 TECRQ9NZ01 308 aaKnown RBP4.02□□□□□ -1.77
SNHG1-207ENST00000537965 MGAT4CQ9UBM8 478 aa4.02□□□□□ -1.77
SNHG1-207ENST00000537965 GAB2Q9UQC2 676 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms