RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TSNAXQ99598 290 aaKnown RBP2.65□□□□□ -1.99
YBX3-205ENST00000536107 PYGO2Q9BRQ0 406 aa2.65□□□□□ -1.99
YBX3-205ENST00000536107 SEPSECSQ9HD40 501 aaKnown RBP2.65□□□□□ -1.99
YBX3-205ENST00000536107 DNAJC4Q9NNZ3 241 aa2.65□□□□□ -1.99
YBX3-205ENST00000536107 INTS9Q9NV88 658 aaKnown RBP2.65□□□□□ -1.99
YBX3-205ENST00000536107 SMPD3Q9NY59 655 aaPredicted RBP2.65□□□□□ -1.99
YBX3-205ENST00000536107 CD300AQ9UGN4 299 aa2.65□□□□□ -1.99
YBX3-205ENST00000536107 PUS1Q9Y606 427 aaKnown RBP eCLIP2.65□□□□□ -1.99
YBX3-205ENST00000536107 SAR1BQ9Y6B6 198 aa2.65□□□□□ -1.99
YBX3-205ENST00000536107 S4R3C0 116 aa2.65□□□□□ -1.99
YBX3-205ENST00000536107 IGKV1-27A0A075B6S5 117 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 IGHV3OR16-12A0A075B7B8 117 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TRBV5-7A0A0A0MS05 114 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TRAV3A0A0B4J244 114 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TMEM30CPA0ZSE6 113 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 ACOD1A6NK06 481 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 DNASE2O00115 360 aaPredicted RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 SPINT2O43291 252 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 SULT1B1O43704 296 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 ITM2AO43736 263 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 GATBO75879 557 aaKnown RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 FADS2O95864 444 aaKnown RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 MAS1LP35410 378 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 MAGEA2P43356 314 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 RBP2P50120 134 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 ZNF137PP52743 207 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 BLVRAP53004 296 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 MTCP1P56278 107 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 MTPNP58546 118 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 FXYD6P3P58550 94 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 PAFAH1B2P68402 229 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 HTD2P86397 168 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 ATP6AP1Q15904 470 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 LRRC23Q53EV4 343 aaPredicted RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 NXNL2Q5VZ03 156 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 GLT8D1Q68CQ7 371 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TMEM42Q69YG0 159 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 MZT2BQ6NZ67 158 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 Q6P435 159 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 ZNF773Q6PK81 442 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 GLDNQ6ZMI3 551 aaPredicted RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 LRRTM1Q86UE6 522 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 OFCC1Q8IZS5 231 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 SPATA4Q8NEY3 305 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TMED6Q8WW62 240 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 RBPMSQ93062 196 aaKnown RBP2.64□□□□□ -1.99
YBX3-205ENST00000536107 FMO2Q99518 471 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 C20orf24Q9BUV8 137 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 OR52D1Q9H346 318 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 NCOR1P1Q9H4R4 102 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 RAB9BQ9NP90 201 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 TAS2R1Q9NYW7 299 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 AASSQ9UDR5 926 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 RAP2CQ9Y3L5 183 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 NACAE9PAV3 2078 aa2.64□□□□□ -1.99
YBX3-205ENST00000536107 C15orf65H3BRN8 121 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 UBDO15205 165 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 ZNF207O43670 478 aaKnown RBP2.63□□□□□ -1.99
YBX3-205ENST00000536107 RBBP9O75884 186 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 C1QBP02746 253 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 CLEC3BP05452 202 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 GIG44P09565 113 aaPredicted RBP2.63□□□□□ -1.99
YBX3-205ENST00000536107 SPI1P17947 270 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 C4BPBP20851 252 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 GALP22466 123 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 GNRHRP30968 328 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 MC5RP33032 325 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 NUDT2P50583 147 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 HNRNPA3P51991 378 aaKnown RBP2.63□□□□□ -1.99
YBX3-205ENST00000536107 CRISP1P54107 249 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 STX1BP61266 288 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 PJVKQ0ZLH3 352 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 UBE2V2Q15819 145 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 Q3ZCU0 254 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 CYBRD1Q53TN4 286 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 PAGE3Q5JUK9 113 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 RSBN1Q5VWQ0 802 aaPredicted RBP2.63□□□□□ -1.99
YBX3-205ENST00000536107 PLET1Q6UQ28 207 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 SCXQ7RTU7 201 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 PRSS35Q8N3Z0 413 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 NEXN-AS1Q8NBZ9 246 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 SLC37A3Q8NCC5 494 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 ZNF439Q8NDP4 499 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 OR10A6Q8NH74 314 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 PLPPR1Q8TBJ4 325 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 NEK7Q8TDX7 302 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 GGHQ92820 318 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 RFT1Q96AA3 541 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 EEF1AKMT3Q96AZ1 226 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 OR2A7Q96R45 310 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 COMMD4Q9H0A8 199 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 REEP1Q9H902 201 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 OR2S2Q9NQN1 319 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 SDR39U1Q9NRG7 319 aaPredicted RBP2.63□□□□□ -1.99
YBX3-205ENST00000536107 SLC2A9Q9NRM0 540 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 SLC35D1Q9NTN3 355 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 WASHC3Q9Y3C0 194 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 SNX13Q9Y5W8 968 aa2.63□□□□□ -1.99
YBX3-205ENST00000536107 RFNGQ9Y644 331 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms