RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NAA20P61599 178 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 FKBP1AP62942 108 aaKnown RBP1.75□□□□□ -2.13
PRKDC-205ENST00000535375 BTN3A2P78410 334 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 ZNF181Q2M3W8 571 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 CCDC122Q5T0U0 273 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.75□□□□□ -2.13
PRKDC-205ENST00000535375 SFXN4Q6P4A7 337 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 ZNF767PQ75MW2 155 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 ZNF550Q7Z398 422 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 GPHB5Q86YW7 130 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 OR4K13Q8NH42 304 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 CLDND2Q8NHS1 167 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 C16orf78Q8WTQ4 265 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 TUBA4BQ9H853 241 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 XPNPEP1Q9NQW7 623 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 SLC2A9Q9NRM0 540 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 ZNF337Q9Y3M9 751 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 MINOS1-NBL1R4GNA1 71 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 SLIT2O94813 1529 aa1.75□□□□□ -2.13
PRKDC-205ENST00000535375 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.74□□□□□ -2.13
PRKDC-205ENST00000535375 MUC21A0A0G2JKD1 596 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 A0A0J9YX75 114 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 MUC21A0A140T8X8 626 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 OR11H12B2RN74 326 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 C9JCJ5 164 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 H3BPC8 53 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 DCTN3O75935 186 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 IGHV1-69P01742 117 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 SERPINB10P48595 397 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 AP2S1P53680 142 aaPredicted RBP1.74□□□□□ -2.13
PRKDC-205ENST00000535375 RBM11P57052 281 aaKnown RBP1.74□□□□□ -2.13
PRKDC-205ENST00000535375 RAB5BP61020 215 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 TNFAIP6P98066 277 aaPredicted RBP1.74□□□□□ -2.13
PRKDC-205ENST00000535375 EMX1Q04741 257 aaPredicted RBP1.74□□□□□ -2.13
PRKDC-205ENST00000535375 RGS21Q2M5E4 152 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 SYPL2Q5VXT5 272 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 OR10K2Q6IF99 312 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 RASSF6Q6ZTQ3 369 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 C2orf91Q6ZV80 131 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 SPATA12Q7Z6I5 190 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 CNEP1R1Q8N9A8 125 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 OR11H2Q8NH07 326 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 CCL13Q99616 98 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 OR51I2Q9H344 312 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 TMEM106BQ9NUM4 274 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 FAM215AQ9Y5M1 114 aa1.74□□□□□ -2.13
PRKDC-205ENST00000535375 ABCC12Q96J65 1359 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 A0A087WUU8 490 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 DISC1C4P0D8 188 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 UBFD1O14562 309 aaKnown RBP1.73□□□□□ -2.13
PRKDC-205ENST00000535375 HLA-DQB2P05538 268 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 SERPINA6P08185 405 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 CSRP1P21291 193 aaKnown RBP1.73□□□□□ -2.13
PRKDC-205ENST00000535375 CD24P25063 80 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 CD200P41217 278 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 ZNF140P52738 457 aaPredicted RBP1.73□□□□□ -2.13
PRKDC-205ENST00000535375 RSU1Q15404 277 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 SS18Q15532 418 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 TMEM31Q5JXX7 168 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 SAPCD1Q5SSQ6 148 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 LPCAT4Q643R3 524 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 GID4Q8IVV7 300 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 DAND5Q8N907 189 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 OR1M1Q8NGA1 313 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 ASB17Q8WXJ9 295 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 GNPNAT1Q96EK6 184 aaPredicted RBP1.73□□□□□ -2.13
PRKDC-205ENST00000535375 SFRP2Q96HF1 295 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 UCK1Q9HA47 277 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 ANAPC10Q9UM13 185 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 GUCA1BQ9UMX6 200 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 COQ4Q9Y3A0 265 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 CACNA1SQ13698 1873 aa1.73□□□□□ -2.13
PRKDC-205ENST00000535375 COL11A1P12107 1806 aaPredicted RBP1.73□□□□□ -2.13
PRKDC-205ENST00000535375 CHD5Q8TDI0 1954 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 VPS37CA5D8V6 355 aaPredicted RBP1.72□□□□□ -2.13
PRKDC-205ENST00000535375 TMEM235A6NFC5 223 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 KNCNA6PVL3 124 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 CALB1P05937 261 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 HIST1H1EP10412 219 aaKnown RBP1.72□□□□□ -2.13
PRKDC-205ENST00000535375 GZMHP20718 246 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 CCR7P32248 378 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 XCL1P47992 114 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 MARCKSL1P49006 195 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 TBPL1P62380 186 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 OR2F1Q13607 317 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 LRRC75BQ2VPJ9 315 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 TMEM176BQ3YBM2 270 aaPredicted RBP1.72□□□□□ -2.13
PRKDC-205ENST00000535375 CCDC121Q6ZUS5 278 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 DCXRQ7Z4W1 244 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 SLC51BQ86UW2 128 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 C1orf158Q8N1D5 194 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 DEFB125Q8N687 156 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 OR2T27Q8NH04 317 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 SGMS2Q8NHU3 365 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 RPS4Y2Q8TD47 263 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 SMCR5Q8TEV8 140 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 TMA16Q96EY4 203 aaKnown RBP1.72□□□□□ -2.13
PRKDC-205ENST00000535375 TMEM222Q9H0R3 208 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 OR51I1Q9H343 314 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms