RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 DNAH7Q8WXX0 4024 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 A0A0B4J203 849 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 TRAV1-2A0A0B4J238 106 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 J3QRK9 145 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 MFNGO00587 321 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 RRASP10301 218 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 HIST1H1DP16402 221 aaKnown RBP13.66□□□□□ -0.22
PCF11-206ENST00000533018 SSBP2P81877 361 aaPredicted RBP13.66□□□□□ -0.22
PCF11-206ENST00000533018 VMA21Q3ZAQ7 101 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 IZUMO2Q6UXV1 221 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 MUC7Q8TAX7 377 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 TMEM68Q96MH6 324 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 ATG5Q9H1Y0 275 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 TNCP24821 2201 aa13.66□□□□□ -0.22
PCF11-206ENST00000533018 SHISA3A0PJX4 238 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 SRRM4A7MD48 611 aaKnown RBP13.65□□□□□ -0.22
PCF11-206ENST00000533018 RAB27BO00194 218 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 MPPED1O15442 326 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 CRYGBP07316 175 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 RAB6AP20340 208 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 AADACP22760 399 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 HSPA13P48723 471 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 SYNJ2BPP57105 145 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 TNXAQ16473 311 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 TMEM177Q53S58 311 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 SGPP2Q8IWX5 399 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 C5orf30Q96GV9 206 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
PCF11-206ENST00000533018 TINAGL1Q9GZM7 467 aaPredicted RBP13.65□□□□□ -0.22
PCF11-206ENST00000533018 SMIM30A4D0T7 59 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 DIRAS3O95661 229 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 CRYZL1O95825 349 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 IGHV4-30-4P0DP06 118 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 TATDN3Q17R31 274 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 C22orf42Q6IC83 251 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 ADTRPQ96IZ2 230 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 DCUN1D5Q9BTE7 237 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 NDUFB11Q9NX14 153 aa13.64□□□□□ -0.23
PCF11-206ENST00000533018 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
PCF11-206ENST00000533018 TRDV1A0A1B0GX56 115 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 ACTL6BO94805 426 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 DUTP33316 252 aaKnown RBP13.63□□□□□ -0.23
PCF11-206ENST00000533018 KLF5Q13887 457 aaPredicted RBP13.63□□□□□ -0.23
PCF11-206ENST00000533018 RPEL1Q2QD12 228 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 ST6GALNAC5Q9BVH7 336 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 PALMDQ9NP74 551 aa13.63□□□□□ -0.23
PCF11-206ENST00000533018 ELF5Q9UKW6 265 aaPredicted RBP13.63□□□□□ -0.23
PCF11-206ENST00000533018 LINC00473A8K010 186 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 H0Y980 276 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 UBE2KP61086 200 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 ARL6IP1Q15041 203 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 PRSS8Q16651 343 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 CDNFQ49AH0 187 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 H1FOOQ8IZA3 346 aaPredicted RBP13.62□□□□□ -0.23
PCF11-206ENST00000533018 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
PCF11-206ENST00000533018 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 TUSC2O75896 110 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 OR9G9P0C7N8 305 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 LYL1P12980 280 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 Q8N1Y9 231 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
PCF11-206ENST00000533018 SRSF12Q8WXF0 261 aaKnown RBP13.61□□□□□ -0.23
PCF11-206ENST00000533018 DDB2Q92466 427 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 ADAM30Q9UKF2 790 aa13.61□□□□□ -0.23
PCF11-206ENST00000533018 FCGR3BO75015 233 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 BRI3O95415 125 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 PRH1P02810 166 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 NFYAP23511 347 aaPredicted RBP13.6□□□□□ -0.23
PCF11-206ENST00000533018 DTYMKP23919 212 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 MRGPRG-AS1Q2M3A8 158 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 OR2B11Q5JQS5 317 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 Q6ZS49 121 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 ZNF645Q8N7E2 425 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
PCF11-206ENST00000533018 SNAPC3Q92966 411 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 PRELID3BQ9Y3B1 194 aa13.6□□□□□ -0.23
PCF11-206ENST00000533018 CREBL2O60519 120 aaPredicted RBP13.59□□□□□ -0.23
PCF11-206ENST00000533018 SAA1P0DJI8 122 aaPredicted RBP13.59□□□□□ -0.23
PCF11-206ENST00000533018 GALP22466 123 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 PSMB9P28065 219 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 HACD4Q5VWC8 232 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 IL34Q6ZMJ4 242 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 KCTD9Q7L273 389 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 NR2C2APQ86WQ0 139 aa13.59□□□□□ -0.23
PCF11-206ENST00000533018 ZNF430Q9H8G1 570 aaPredicted RBP13.59□□□□□ -0.23
PCF11-206ENST00000533018 RYR2Q92736 4967 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 NOTOA8MTQ0 251 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 CTXN2P0C2S0 81 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 CD36P16671 472 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms