RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 VGLL4Q14135 290 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 EDDM3AQ14507 147 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 BATFQ16520 125 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 HIST2H2BEQ16778 126 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 ZSWIM7Q19AV6 140 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 COA6Q5JTJ3 125 aaKnown RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 ZNF660Q6AZW8 331 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 UFSP1Q6NVU6 142 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 WDR74Q6RFH5 385 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 UNQ5815/PRO19632Q6UWF5 114 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 HEPN1Q6WQI6 88 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 Q6ZSR6 202 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 FA2HQ7L5A8 372 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 FAM19A5Q7Z5A7 132 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 OAFQ86UD1 273 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 ZNF429Q86V71 674 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 GKN2Q86XP6 184 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 ZADH2Q8N4Q0 377 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 KIR3DL3Q8N743 410 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 SLC35G3Q8N808 338 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 ZFP41Q8N8Y5 198 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 VN1R2Q8NFZ6 395 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 OR52I1Q8NGK6 324 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 OR1F12Q8NHA8 337 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 BLNKQ8WV28 456 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 DCUN1D4Q92564 292 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 HIST1H2BHQ93079 126 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TSLPQ969D9 159 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 IL22RA2Q969J5 263 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 NEIL2Q969S2 332 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 CLDN23Q96B33 292 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 C16orf74Q96GX8 76 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 LINC00477Q96M19 166 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 CDX2Q99626 313 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 HIST1H2BNQ99877 126 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 HIST1H2BMQ99879 126 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 PSMG3Q9BT73 122 aaPredicted RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 OR11A1Q9GZK7 315 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TMEM126AQ9H061 195 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TMEM133Q9H2Q1 129 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 OR51I2Q9H344 312 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 MAP1LC3AQ9H492 121 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 RHOJQ9H4E5 214 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TAF9BQ9HBM6 251 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 STARD5Q9NSY2 213 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 ASF1BQ9NVP2 202 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 IDI2-AS1Q9NZ38 188 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 LHX3Q9UBR4 397 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TBX21Q9UL17 535 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 TRAPPC2LQ9UL33 140 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 YARS2Q9Y2Z4 477 aaKnown RBP2.6□□□□□ -1.99
CD44-217ENST00000525348 V9GYH0 126 aa2.6□□□□□ -1.99
CD44-217ENST00000525348 MON2Q7Z3U7 1717 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 ARAP2Q8WZ64 1704 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 NFAT5O94916 1531 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A0D9SG52 128 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 SMIM28A0A1B0GU29 152 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A1B0GW64 132 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A1B0GX51 115 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A1W2PRF3 423 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A1W2PRM7 423 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 A0A1W2PRS3 328 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 LRP5LA4QPB2 252 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 FAM183AA6NL82 134 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 FABP5P3A8MUU1 101 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 OR7A17O14581 309 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 SLC37A4O43826 429 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IGHV3-23P01764 117 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 PFN1P07737 140 aaKnown RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 H2AFZP0C0S5 128 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IGLC1P0CG04 106 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 PGA3P0DJD8 388 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IGHV1-2P23083 117 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 NPY1RP25929 384 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 HTR1DP28221 377 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IMPA1P29218 277 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 AGTR1P30556 359 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 CXCL12P48061 93 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 SULT1A1P50225 295 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 SULT1A2P50226 295 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 CTBP2P56545 445 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 TAS2R31P59538 309 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 PFN3P60673 137 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 RAB8AP61006 207 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 RPS28P62857 69 aaKnown RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 EIF5AP63241 154 aaKnown RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 FAM53BQ14153 422 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 TAL2Q16559 108 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 GLYATL3Q5SZD4 288 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 GLT8D1Q68CQ7 371 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 LAIR2Q6ISS4 152 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 SFXN4Q6P4A7 337 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 DUX4L9Q6RFH8 374 aaPredicted RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 FOXI2Q6ZQN5 318 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 C6orf120Q7Z4R8 191 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IFNEQ86WN2 208 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 C20orf196Q8IYI0 205 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 280.2 ms