RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 METTL1Q9UBP6 276 aaKnown RBP10.13□□□□□ -0.79
VEGFA-224ENST00000523873 SRRM4A7MD48 611 aaKnown RBP10.12□□□□□ -0.79
VEGFA-224ENST00000523873 FCN1O00602 326 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 SHOXO15266 292 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-224ENST00000523873 SLC22A5O76082 557 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 RAB3DO95716 219 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 CD74P04233 296 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 ZNF735P0CB33 412 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 PPP5CP53041 499 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 BRWD1-AS2P59051 145 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 NDPQ00604 133 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 CNPY1Q3B7I2 92 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 STEAP1BQ6NZ63 245 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 ZNF66Q6ZN08 573 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 OR51H1Q8NH63 302 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-224ENST00000523873 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
VEGFA-224ENST00000523873 RABL2AQ9UBK7 228 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-224ENST00000523873 RABL2BQ9UNT1 228 aa10.12□□□□□ -0.79
VEGFA-224ENST00000523873 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 RAMP3O60896 148 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 CA2P00918 260 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 RLN1P04808 185 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 IFNA6P05013 189 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 CSF1P09603 554 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 RRASP10301 218 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 SSBP1Q04837 148 aaKnown RBP10.11□□□□□ -0.79
VEGFA-224ENST00000523873 CBX3Q13185 183 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 MSMO1Q15800 293 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 SCGB2B2Q4G0G5 96 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 LIN54Q6MZP7 749 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 CENPVQ7Z7K6 275 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-224ENST00000523873 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 ZBTB34Q8NCN2 500 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 OR5AU1Q8NGC0 362 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 OR4C16Q8NGL9 310 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 TSNAXQ99598 290 aaKnown RBP10.11□□□□□ -0.79
VEGFA-224ENST00000523873 RNF5Q99942 180 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 THAP7Q9BT49 309 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-224ENST00000523873 PARP11Q9NR21 331 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 PRELID3BQ9Y3B1 194 aa10.11□□□□□ -0.79
VEGFA-224ENST00000523873 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 GPR31O00270 319 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 FBXO24O75426 580 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-224ENST00000523873 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 CRYGBP07316 175 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 AKAIN1P0CW23 69 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 PGAM2P15259 253 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 PI3P19957 117 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 TAGLNQ01995 201 aaKnown RBP10.1□□□□□ -0.79
VEGFA-224ENST00000523873 PJVKQ0ZLH3 352 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 IDO2Q6ZQW0 420 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 LHFPL1Q86WI0 220 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 FOXRED2Q8IWF2 684 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 VKORC1L1Q8N0U8 176 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 STPG2Q8N412 459 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 TRIM63Q969Q1 353 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 SRRQ9GZT4 340 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 FBXO7Q9Y3I1 522 aa10.1□□□□□ -0.79
VEGFA-224ENST00000523873 TENM1Q9UKZ4 2725 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ANKRD20A5PA0PJZ0 165 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 G3V318 75 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 AP4M1O00189 453 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ARPC1BO15143 372 aaKnown RBP10.09□□□□□ -0.79
VEGFA-224ENST00000523873 KCNAB3O43448 404 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 SPDEFO95238 335 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 SAA1P0DJI8 122 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-224ENST00000523873 TBPP20226 339 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ETV6P41212 452 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 LGALS7P47929 136 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 GNB1P62873 340 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 CX3CL1P78423 397 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 MRGPRG-AS1Q2M3A8 158 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 TCTEX1D4Q5JR98 221 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 SPANXN2Q5MJ10 180 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 SPAG16Q8N0X2 631 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ARRDC1Q8N5I2 433 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-224ENST00000523873 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
VEGFA-224ENST00000523873 OR51J1Q9H342 316 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 WSB1Q9Y6I7 421 aa10.09□□□□□ -0.79
VEGFA-224ENST00000523873 ANK2Q01484 3957 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 A0A1W2PRX2 142 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 RPA2P15927 270 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 KIR2DS2P43631 304 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 UCP3P55916 312 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 SSBP2P81877 361 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-224ENST00000523873 CATR1Q13166 79 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 KLF9Q13886 244 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-224ENST00000523873 MEF2DQ14814 521 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms