RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FLNCQ14315 2725 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 RELNP78509 3460 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 IGLV3-12A0A075B6K2 115 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 FAM90A10PA6NDY2 464 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM233B4DJY2 109 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 K7EP34 96 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 GSTZ1O43708 216 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 CT62P0C5K7 136 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 COL8A1P27658 744 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 TSPOP30536 169 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 PYCR1P32322 319 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 NKX2-1P43699 371 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 ZFP36L2P47974 494 aaKnown RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 GLIPR1P48060 266 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 EMP1P54849 157 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 DIO3P55073 304 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 YPEL3P61236 119 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 PSG7Q13046 419 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 FAM53BQ14153 422 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 GLYATL3Q5SZD4 288 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 LCN10Q6JVE6 187 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 CYP2R1Q6VVX0 501 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 Q6ZN92 141 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 C1QL2Q7Z5L3 287 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 PPP1R32Q7Z5V6 425 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 ADAD2Q8NCV1 583 aaKnown RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 OR52R1Q8NGF1 315 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 OR52I1Q8NGK6 324 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 OR1L8Q8NGR8 309 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 OR2K2Q8NGT1 345 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 OR6K6Q8NGW6 343 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 ZNRF4Q8WWF5 429 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 SH2D2AQ9NP31 389 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 METRNQ9UJH8 293 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 TCF19Q9Y242 345 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 POLDIP2Q9Y2S7 368 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF780BQ9Y6R6 833 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 HECTD1Q9ULT8 2610 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 ICE1Q9Y2F5 2266 aa6.36□□□□□ -1.39
HDAC3-216ENST00000523088 PRRC2CQ9Y520 2896 aaKnown RBP6.36□□□□□ -1.39
HDAC3-216ENST00000523088 SVILO95425 2214 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 ZGRF1Q86YA3 2104 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 FXYD6-FXYD2A0A087WZ82 144 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 LRRC3CA6NJW4 275 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 C9JAW5 83 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 H0YJW9 148 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 DIRAS1O95057 198 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 AGFG2O95081 481 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 NDUFA7O95182 113 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SCTP09683 121 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 ZGLP1P0C6A0 271 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SEC11BP0C7V7 166 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 VPREB1P12018 145 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PIPP12273 146 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 GP1BBP13224 206 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PGCP20142 388 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 LOXP28300 417 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 BLVRBP30043 206 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF93P35789 620 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 AVPR1BP47901 424 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 EFNB2P52799 333 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PGGT1BP53609 377 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 TPPP2P59282 170 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 UBE2MP61081 183 aaKnown RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 KLRD1Q13241 179 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 MELKQ14680 651 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 IGFBP7Q16270 282 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 DUSP5Q16690 384 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 CRB2Q5IJ48 1285 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SOHLH1Q5JUK2 328 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 IGFL2Q6UWQ7 119 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 Q6ZS92 163 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 TBC1D26Q86UD7 250 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 C1orf174Q8IYL3 243 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 OR4C13Q8NGP0 309 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 Q8TCH9 128 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SSC4DQ8WTU2 575 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SLC38A5Q8WUX1 472 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 WNT2BQ93097 391 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 OR4C12Q96R67 309 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 RASL11BQ9BPW5 248 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 FXYD6Q9H0Q3 95 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PARLQ9H300 379 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 NPVFQ9HCQ7 196 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 CA10Q9NS85 328 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 FLRT3Q9NZU0 649 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PEMTQ9UBM1 199 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 MARCOQ9UEW3 520 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 C19orf25Q9UFG5 118 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-216ENST00000523088 TAC3Q9UHF0 121 aa6.35□□□□□ -1.39
HDAC3-216ENST00000523088 PRNDQ9UKY0 176 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms