RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TAGLNQ01995 201 aaKnown RBP6.95□□□□□ -1.3
VAPB-206ENST00000520497 LOXL1Q08397 574 aaPredicted RBP6.95□□□□□ -1.3
VAPB-206ENST00000520497 NDUFA5Q16718 116 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 SPNS3Q6ZMD2 512 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 C1orf229Q6ZS94 237 aaPredicted RBP6.95□□□□□ -1.3
VAPB-206ENST00000520497 ACOT7LQ6ZUV0 252 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 SPAG16Q8N0X2 631 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 OR9G1Q8NH87 305 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 OR1S1Q8NH92 325 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 TNFRSF14Q92956 283 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 OR10C1Q96KK4 312 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 GPHA2Q96T91 129 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 ZNF251Q9BRH9 671 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 ARL6Q9H0F7 186 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 SIRPDQ9H106 197 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 PLEKHA2Q9HB19 425 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 MMP26Q9NRE1 261 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 SDHAF2Q9NX18 166 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 ONECUT1Q9UBC0 465 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 RNF150Q9ULK6 438 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 TNFSF18Q9UNG2 199 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 NSG2Q9Y328 171 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 SAA2-SAA4A0A096LPE2 208 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 TRAV14DV4A0A0A6YYC5 116 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 G3V3Q6 166 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 J3QR06 171 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 M0R1X1 148 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 RGS13O14921 159 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 RBFOX2O43251 390 aaKnown RBP eCLIP6.94□□□□□ -1.38e-6■■□□□ 11.5
VAPB-206ENST00000520497 MED6O75586 246 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 PRTN3P24158 256 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 DUTP33316 252 aaKnown RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 LPAR6P43657 344 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 NKX2-1P43699 371 aaPredicted RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 GNG10P50151 68 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 ARHGDIBP52566 201 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 ZNF137PP52743 207 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 DLX1P56177 255 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 ARF6P62330 175 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 UBA52P62987 128 aaKnown RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 RAB32Q13637 225 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 OPCMLQ14982 345 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 RTL8BQ17RB0 113 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 HCP5Q6MZN7 132 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 FAM71F2Q6NXP2 309 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 TMUB2Q71RG4 321 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 LYG1Q8N1E2 194 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 ABHD12Q8N2K0 398 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 BEND2Q8NDZ0 799 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 OR8H1Q8NGG4 311 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 CLEC7AQ9BXN2 247 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 GSX1Q9H4S2 264 aaPredicted RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 ZNRD1Q9P1U0 126 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 AMMECR1Q9Y4X0 333 aaPredicted RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 LSM5Q9Y4Y9 91 aaKnown RBP6.94□□□□□ -1.3
VAPB-206ENST00000520497 INSIG2Q9Y5U4 225 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 POMT1Q9Y6A1 747 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 NAV3Q8IVL0 2385 aa6.94□□□□□ -1.3
VAPB-206ENST00000520497 NF1P21359 2839 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 LINC00473A8K010 186 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 ODF3BA8MYP8 253 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 K7EPK0 472 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 TOR1AO14656 332 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 TAAR5O14804 337 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 BCL2L11O43521 198 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 GPR137BO60478 399 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 DEDDO75618 318 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 SCAF4O95104 1147 aaKnown RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 LY86O95711 162 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 HPRT1P00492 218 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 APOA2P02652 100 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 MSMBP08118 114 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 RRASP10301 218 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 LYL1P12980 280 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 AP2S1P53680 142 aaPredicted RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 DVL1P1P54792 670 aaPredicted RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 PRRX1P54821 245 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 BRWD1-AS2P59051 145 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 RAB14P61106 215 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 PAX8Q06710 450 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 HLA-DRB5Q30154 266 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 RPL39P5Q59GN2 51 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 Q5BKY6 102 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 GPR157Q5UAW9 335 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 LAMTOR1Q6IAA8 161 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 DHRS7BQ6IAN0 325 aaPredicted RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 BTNL3Q6UXE8 466 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 ZNF833PQ6ZTB9 187 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 H2BFWTQ7Z2G1 175 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 FOXRED2Q8IWF2 684 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms