RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FHAD1B1AJZ9 1412 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 C17orf51A8MQB3 221 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 NDUFB2O95178 105 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR5G3P0C626 314 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 CCL1P22362 96 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 REG1BP48304 166 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 RAP1GDS1P52306 607 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 TCL1AP56279 114 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 FKBP1AP62942 108 aaKnown RBP2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 RASL11AQ6T310 242 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 BAP18Q8IXM2 172 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 LRRC34Q8IZ02 419 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 IMP4Q96G21 291 aaKnown RBP2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 MND1Q9BWT6 205 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 LSM5Q9Y4Y9 91 aaKnown RBP2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 SHROOM2Q13796 1616 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 BIVM-ERCC5R4GMW8 1640 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 LCTP09848 1927 aa2.7□□□□□ -1.98
HMGB1P47-201ENST00000511281 PRG4Q92954 1404 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 ERICH3Q5RHP9 1530 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF638Q14966 1978 aaKnown RBP2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 GRIFINA4D1Z8 144 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 TMEM210A6NLX4 147 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 TP53I11O14683 189 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 LY6HO94772 140 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF117Q03924 483 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 HTR4Q13639 388 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 TAF9Q16594 264 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 LGALS9BQ3B8N2 356 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 LGALS9CQ6DKI2 356 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 DEFB125Q8N687 156 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR10A6Q8NH74 314 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 LMX1AQ8TE12 382 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 CCL13Q99616 98 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF337Q9Y3M9 751 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 PRXQ9BXM0 1461 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF407Q9C0G0 2248 aa2.69□□□□□ -1.98
HMGB1P47-201ENST00000511281 SHANK3Q9BYB0 1731 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 TRPM3Q9HCF6 1732 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 IGHV3-73A0A0B4J1V6 119 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 A0A1B0GW54 56 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 RPP14O95059 124 aaKnown RBP2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 CTXN2P0C2S0 81 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 SLC25A16P16260 332 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 LGALS3P17931 250 aaKnown RBP2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 CRHBPP24387 322 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 TNFAIP6P98066 277 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 HCP5Q6MZN7 132 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 C5orf46Q6UWT4 87 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 AMTNQ6UX39 209 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 TMEM86BQ8N661 226 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 DIRAS2Q96HU8 199 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 CCDC42Q96M95 316 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 FKBP14Q9NWM8 211 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 SNX12Q9UMY4 172 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 SLC22A13Q9Y226 551 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 NLRC5Q86WI3 1866 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 ADCY10Q96PN6 1610 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 CLIP1P30622 1438 aa2.68□□□□□ -1.98
HMGB1P47-201ENST00000511281 RAPGEF2Q9Y4G8 1499 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 A0A1W2PQL4 384 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 C9JCJ5 164 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 G3V3Q6 166 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 KPNA3O00505 521 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 HLA-DQB2P05538 268 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 LPAR6P43657 344 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 SULT1A1P50225 295 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF140P52738 457 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 LSM6P62312 80 aaKnown RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 CCL7P80098 99 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 MRPS15P82914 257 aaKnown RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 SAPCD1Q5SSQ6 148 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 GPHB5Q86YW7 130 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR2T27Q8NH04 317 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 ITFG2Q969R8 447 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 GNPNAT1Q96EK6 184 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 MGLLQ99685 303 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR51V1Q9H2C8 321 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 SLC2A9Q9NRM0 540 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 ANAPC10Q9UM13 185 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 HSPE1-MOB4S4R3N1 261 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 DSCAMO60469 2012 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 KIF13AQ9H1H9 1805 aa2.67□□□□□ -1.98
HMGB1P47-201ENST00000511281 PLXNB1O43157 2135 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 DIP2BQ9P265 1576 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 ABCC10Q5T3U5 1492 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 ATG2BQ96BY7 2078 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 IGHV1-69-2A0A0G2JMI3 117 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR4C45A6NMZ5 311 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 TCRBP04435 133 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 OMPP47874 163 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 IDH3GP51553 393 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 TBPL1P62380 186 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 PRDX4Q13162 271 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 SPOPLQ6IQ16 392 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 C8orf74Q6P047 294 aa2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF322Q6U7Q0 402 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P47-201ENST00000511281 ALKAL1Q6UXT8 129 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms