RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 THAP10Q9P2Z0 257 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 B4GALT7Q9UBV7 327 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC2A6Q9UGQ3 507 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 AK3Q9UIJ7 227 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 WSB1Q9Y6I7 421 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 MCM3APO60318 1980 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGLV3-10A0A075B6K4 115 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A087WUU8 490 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A087WX48 190 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A1B0GX51 115 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 MED19A0JLT2 244 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CD300LBA8K4G0 201 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 C9JQL5 133 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CDC42EP2O14613 210 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 FCN3O75636 299 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 TRAPPC6AO75865 159 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 SFT2D2O95562 160 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGLV3-27P01718 113 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CA3P07451 260 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DANCRP0C864 163 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 PRSS56P0CW18 603 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 VPREB1P12018 145 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 FCGR2BP31994 310 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ADRA1AP35348 466 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF93P35789 620 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DAP3P51398 398 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DLX6P56179 175 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 SMIM11AP58511 58 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 RPL8P62917 257 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ARG2P78540 354 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC25A11Q02978 314 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF92Q03936 586 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 MFGE8Q08431 387 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ADIGQ0VDE8 80 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 KLRD1Q13241 179 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 IL11RAQ14626 422 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 PAFAH1B3Q15102 231 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DUSP5Q16690 384 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 POM121L1PQ3SYA9 428 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 TDRG1Q3Y452 100 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 C6orf136Q5SQH8 315 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 TIMM23BQ5SRD1 257 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF678Q5SXM1 525 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DPPA3Q6W0C5 159 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 C19orf35Q6ZS72 473 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 Q6ZSR6 202 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 Q6ZSR9 355 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 Q75L30 129 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CDC20BQ86Y33 519 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 UMODL1-AS1Q8N2C9 162 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 LRRC25Q8N386 305 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR10G9Q8NGN4 311 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR4F5Q8NH21 305 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR51E1Q8TCB6 317 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 MBD3L1Q8WWY6 194 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 ST8SIA1Q92185 356 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 NDRG1Q92597 394 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 LHX4Q969G2 390 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 APOBEC3DQ96AK3 386 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 COQ2Q96H96 371 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 MCEEQ96PE7 176 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CDX2Q99626 313 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 SPAG8Q99932 426 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 NMNAT2Q9BZQ4 307 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 CHRNA10Q9GZZ6 450 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 IFI27L2Q9H2X8 130 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 PRSS16Q9NQE7 514 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 LSM7Q9UK45 103 aaKnown RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 DNAJC15Q9Y5T4 150 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 SOX21Q9Y651 276 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 V9GYY9 64 aa3.84□□□□□ -1.79
HMGB3P13-201ENST00000511263 NUP210LQ5VU65 1888 aa3.84□□□□□ -1.8
HMGB3P13-201ENST00000511263 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 TRAV36DV7A0A075B6V5 113 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 A0A0G2JLM5 398 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 ODAMA1E959 279 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 RBFOX3A6NFN3 312 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR2T8A6NH00 312 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 SAP18O00422 153 aaKnown RBP3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 ST8SIA3O43173 380 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 MLNRO43193 412 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 TIMM8AO60220 97 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 GPR137BO60478 399 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF253O75346 499 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF217O75362 1048 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 HSBP1O75506 76 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 DHRS3O75911 302 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 TBX6O95947 436 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 MOSP00540 346 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 HRASP01112 189 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 PRH1P02810 166 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 SPINK8P0C7L1 97 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 CT45A6P0DMU7 189 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 CT45A5P0DMU8 189 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 CT45A7P0DMV0 189 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 ADRA2CP18825 462 aa3.83□□□□□ -1.8
HMGB3P13-201ENST00000511263 NTSP30990 170 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms