RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PARP11Q9NR21 331 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 TAS2R8Q9NYW2 309 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 KLK11Q9UBX7 282 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 RSL24D1Q9UHA3 163 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF580Q9UK33 172 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 FBXO7Q9Y3I1 522 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 A0A1W2PRX2 142 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 TCRBV4S1A1TA0A5B7 111 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 CRYZL1O95825 349 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 CRYGBP07316 175 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 BRWD1-AS2P59051 145 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 SSBP2P81877 361 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 DGCR2P98153 550 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 OR2B11Q5JQS5 317 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 MCFD2Q8NI22 146 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 MOB3AQ96BX8 217 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 CLCC1Q96S66 551 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 HSD17B10Q99714 261 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 MMP27Q9H306 513 aa14.32□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF701M0R085 212 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 SHOXO15266 292 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 TNFSF12O43508 249 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 FCGR3BO75015 233 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 LGALS7P47929 136 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 HERV-K104P61576 105 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 SLC35B1P78383 322 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 CX3CL1P78423 397 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 CBX3Q13185 183 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF818PQ6ZRF7 136 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 MFSD4AQ8N468 514 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 FAM110DQ8TAY7 271 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 TCTEX1D2Q8WW35 142 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 DIRAS2Q96HU8 199 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 MTFP1Q9UDX5 166 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 TSSC4Q9Y5U2 329 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 WSB1Q9Y6I7 421 aa14.31□□□□□ -0.12
PDLIM7-216ENST00000506537 G3V318 75 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 M0QYG6 137 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 CA2P00918 260 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 OPN1MWP04001 364 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 OPN1MW2P0DN77 364 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 OPN1MW3P0DN78 364 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 EGR2P11161 476 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 GNRHRP30968 328 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 PJVKQ0ZLH3 352 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 MRGPRG-AS1Q2M3A8 158 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 C19orf54Q5BKX5 351 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 LCNL1Q6ZST4 164 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 C15orf40Q8WUR7 153 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 PRELID3BQ9Y3B1 194 aa14.3□□□□□ -0.12
PDLIM7-216ENST00000506537 GABARAPH6UMI1 98 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 ARPC1BO15143 372 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 VDAC1P21796 283 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 PPIFP30405 207 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 TNFSF8P32971 234 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 CRIP2P52943 208 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 KHDC1LQ5JSQ8 128 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 VAX1Q5SQQ9 334 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 PPP1R27Q86WC6 154 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 COMMD1Q8N668 190 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 OR6F1Q8NGZ6 308 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 SMIM4Q8WVI0 70 aa14.29□□□□□ -0.12
PDLIM7-216ENST00000506537 MEGF8Q7Z7M0 2845 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 TRAV41A0A0B4J266 112 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 IGHG4P01861 327 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 CD3DP04234 171 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 RPLP1P05386 114 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 UBE2KP61086 200 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 IL18Q14116 193 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 ECSCRQ19T08 205 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 PYHIN1Q6K0P9 492 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 TEX38Q6PEX7 206 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF562Q6V9R5 426 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 IDO2Q6ZQW0 420 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 C18orf65Q6ZTR6 163 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 RNF152Q8N8N0 203 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 FCAMRQ8WWV6 532 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 R3HDM4Q96D70 268 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 SOSTQ9BQB4 213 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 FAM103A1Q9BTL3 118 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 GON7Q9BXV9 100 aa14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 TINAGL1Q9GZM7 467 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-216ENST00000506537 RAMP3O60896 148 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 SAA1P0DJI8 122 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 MRPS10P82664 201 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 FOXE3Q13461 319 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 ACTBL2Q562R1 376 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 FOXB2Q5VYV0 432 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 MINDY2Q8NBR6 621 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 OR4D10Q8NGI6 311 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 NUBP2Q9Y5Y2 271 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 A3GALT2U3KPV4 340 aa14.27□□□□□ -0.13
PDLIM7-216ENST00000506537 CTDSPLO15194 276 aa14.26□□□□□ -0.13
PDLIM7-216ENST00000506537 SOX15O60248 233 aa14.26□□□□□ -0.13
PDLIM7-216ENST00000506537 IGLV1-40P01703 118 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms