RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 HOXB4P17483 251 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-211ENST00000476772 Q5PR19 223 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 Q6ZRM9 215 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 FOXRED2Q8IWF2 684 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 PDZD9Q8IXQ8 264 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 THAP6Q8TBB0 222 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 R3HDM4Q96D70 268 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 BOLA1Q9Y3E2 137 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 MMP24Q9Y5R2 645 aa23.4■■□□□ 1.34
VEGFA-211ENST00000476772 ATG12O94817 140 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 MBPP02686 304 aaPredicted RBP23.39■■□□□ 1.34
VEGFA-211ENST00000476772 P0C879 139 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 SLC25A4P12235 298 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 TBX15Q96SF7 602 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 RNF126Q9BV68 326 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 CACNG5Q9UF02 275 aa23.39■■□□□ 1.34
VEGFA-211ENST00000476772 A0A1B0GU03 582 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 MARCH11A6NNE9 402 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 ODF3BA8MYP8 253 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 RNASEK-C17orf49H0YIS7 233 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 H0YJW9 148 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 SLC25A6P12236 298 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 PLSCR3Q9NRY6 295 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 LSM5Q9Y4Y9 91 aaKnown RBP23.38■■□□□ 1.33
VEGFA-211ENST00000476772 HMSDA8MTL9 139 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 ARPC5O15511 151 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 SMCO1Q147U7 214 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 RTL8BQ17RB0 113 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 OR5AN1Q8NGI8 311 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 OR5AC2Q9NZP5 309 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 HSPB11Q9Y547 144 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 APCP25054 2843 aa23.38■■□□□ 1.33
VEGFA-211ENST00000476772 WNK2Q9Y3S1 2297 aa23.37■■□□□ 1.33
VEGFA-211ENST00000476772 APOA2P02652 100 aa23.37■■□□□ 1.33
VEGFA-211ENST00000476772 LDLRAD2Q5SZI1 272 aa23.37■■□□□ 1.33
VEGFA-211ENST00000476772 PRSS54Q6PEW0 395 aa23.37■■□□□ 1.33
VEGFA-211ENST00000476772 A0A1W2PRD5 423 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 A0A1W2PRF3 423 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 A0A1W2PRM7 423 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 LY6LH3BQJ8 138 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 K7EPK0 472 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 PITX3O75364 302 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 IGKV1-16P04430 117 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 LGALSLQ3ZCW2 172 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-211ENST00000476772 ZNF546Q86UE3 836 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 FAM71E2Q8N5Q1 922 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 OR1S1Q8NH92 325 aa23.36■■□□□ 1.33
VEGFA-211ENST00000476772 NXPH3O95157 252 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 PET100P0DJ07 73 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 HTR1DP28221 377 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 NKX2-1P43699 371 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-211ENST00000476772 PAX8Q06710 450 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 CXorf66Q5JRM2 361 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-211ENST00000476772 SSX9Q7RTT3 188 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 H2BFWTQ7Z2G1 175 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 VKORC1L1Q8N0U8 176 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 RPEQ96AT9 228 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 NAV2Q8IVL1 2488 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 H7C2Y5 167 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 MSMBP08118 114 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 LYL1P12980 280 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 NQO2P16083 231 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 CXCL2P19875 107 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 TAGLNQ01995 201 aaKnown RBP23.35■■□□□ 1.33
VEGFA-211ENST00000476772 DHRS7BQ6IAN0 325 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-211ENST00000476772 TMEM65Q6PI78 240 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 DMBX1Q8NFW5 382 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 DCUN1D4Q92564 292 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 POMT1Q9Y6A1 747 aa23.35■■□□□ 1.33
VEGFA-211ENST00000476772 ST8SIA3O43173 380 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 DEDDO75618 318 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 GAPDHP04406 335 aaKnown RBP23.34■■□□□ 1.33
VEGFA-211ENST00000476772 MIDNQ504T8 468 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 KRTAP1-3Q8IUG1 177 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 LHX4Q969G2 390 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 DPM3Q9P2X0 92 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 TNFSF18Q9UNG2 199 aa23.34■■□□□ 1.33
VEGFA-211ENST00000476772 LEUTXA8MZ59 168 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 RRASP10301 218 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 ERVK-16P61578 105 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 TPTE2P1Q5T6R2 138 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 LHFPL4Q7Z7J7 247 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 C1orf159Q96HA4 380 aa23.33■■□□□ 1.33
VEGFA-211ENST00000476772 IGHV1-3A0A0C4DH29 117 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 B4DSR2 109 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 RNF223E7ERA6 249 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 KCNAB3O43448 404 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 ID3Q02535 119 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 ZFP57Q9NU63 452 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 COA4Q9NYJ1 87 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 RCL1Q9Y2P8 373 aaKnown RBP23.32■■□□□ 1.32
VEGFA-211ENST00000476772 WASHC3Q9Y3C0 194 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 IGHV3-72A0A0B4J1Y9 119 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 TXNL1O43396 289 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 RLN2P04090 185 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 POLR2GP62487 172 aaKnown RBP eCLIP23.32■■□□□ 1.32
VEGFA-211ENST00000476772 PRSS57Q6UWY2 283 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 PDPNQ86YL7 162 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 MAGT1Q9H0U3 335 aa23.32■■□□□ 1.32
VEGFA-211ENST00000476772 OR9G9P0C7N8 305 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms