RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TLX3O43711 291 aaPredicted RBP11.65□□□□□ -0.55
HDAC1-206ENST00000476391 HSBP1O75506 76 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 CGAP01215 116 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 AMY1AP04745 511 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 OR10J4P0C629 311 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 REG1BP48304 166 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 C17orf67Q0P5P2 114 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 MMP17Q9ULZ9 603 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 C2orf70A6NJV1 201 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 G3V3Y1 287 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 FBXW4P57775 412 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 PCSK4Q6UW60 755 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 WFDC12Q8WWY7 111 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 COMMD5Q9GZQ3 224 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 C1RLQ9NZP8 487 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 IGKV3D-11A0A0A0MRZ8 115 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 SMIM17P0DL12 118 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 DEFA4P12838 97 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 NPY1RP25929 384 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 ARF1P84077 181 aaKnown RBP11.64□□□□□ -0.55
HDAC1-206ENST00000476391 Q5PR19 223 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
HDAC1-206ENST00000476391 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 TMEM108Q6UXF1 575 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 C18orf32Q8TCD1 76 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 OXGR1Q96P68 337 aa11.64□□□□□ -0.55
HDAC1-206ENST00000476391 TMEM265A0A087WTH1 108 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 CA7P43166 264 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
HDAC1-206ENST00000476391 ULBP2Q9BZM5 246 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 TMEM38BQ9NVV0 291 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 COPS7AQ9UBW8 275 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 HS3ST3A1Q9Y663 406 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 RP1P56715 2156 aa11.63□□□□□ -0.55
HDAC1-206ENST00000476391 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 M0R2Z0 102 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 TNFSF11O14788 317 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 CRXO43186 299 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-206ENST00000476391 GDF1P27539 372 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-206ENST00000476391 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 TNXAQ16473 311 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF441Q8N8Z8 693 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 OR2AE1Q8NHA4 323 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 C11orf52Q96A22 123 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 GUCD1Q96NT3 240 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 LIN7CQ9NUP9 197 aaKnown RBP11.62□□□□□ -0.55
HDAC1-206ENST00000476391 PLEK2Q9NYT0 353 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 RARRES3Q9UL19 164 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 PSG11Q9UQ72 335 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 APCSP02743 223 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 CRYBB3P26998 211 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 SSTR5P35346 364 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 PTGDSP41222 190 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF776Q68DI1 518 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-206ENST00000476391 TMEM70Q9BUB7 260 aa11.62□□□□□ -0.55
HDAC1-206ENST00000476391 TRAV38-1A0A0B4J264 116 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 GNG7O60262 68 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 CXorf1O96002 111 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 MT-CO2P00403 227 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 EN2P19622 333 aaPredicted RBP11.61□□□□□ -0.55
HDAC1-206ENST00000476391 C10orf128Q5T292 105 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 ABI3Q9P2A4 366 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 C7orf71A4D174 169 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 TRAPPC2LH3BP13 241 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 EFNA2O43921 213 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 SMPD2O60906 423 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF16P17020 682 aaPredicted RBP11.61□□□□□ -0.55
HDAC1-206ENST00000476391 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF585BQ52M93 769 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 Q8N7P7 452 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 ST6GALNAC6Q969X2 333 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 CLDN23Q96B33 292 aa11.61□□□□□ -0.55
HDAC1-206ENST00000476391 KIR2DS5A0A0G2JLQ3 304 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 A0A0G2JNG1 304 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 KIR2DS3K7RE56 304 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ARL14EPLP0DKL9 152 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 SEC11AP67812 179 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 KIR2DS5Q14953 304 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF718Q3SXZ3 478 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF611Q8N823 705 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 SLC37A2Q8TED4 501 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 CHRDL1Q9BU40 450 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 OR2D2Q9H210 308 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-206ENST00000476391 ZNF391Q9UJN7 358 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms