RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 SPIN3Q5JUX0 258 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 OR5AU1Q8NGC0 362 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 ZFHX4Q86UP3 3567 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
CCNL1-216ENST00000475298 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 F6UZH7 168 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 HS3ST1O14792 307 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 MT-CO3P00414 261 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 SRPXP78539 464 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 SPATA46Q5T0L3 261 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 Q6ZN92 141 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 OR4C5Q8NGB2 326 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 APOBEC3DQ96AK3 386 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-216ENST00000475298 POM121L2Q96KW2 1035 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 PSMG3Q9BT73 122 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-216ENST00000475298 DEFB127Q9H1M4 99 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 TUBG2Q9NRH3 451 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 TAAR3PQ9P1P4 343 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 ABI3Q9P2A4 366 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 HSPB7Q9UBY9 170 aa10.95□□□□□ -0.66
CCNL1-216ENST00000475298 DOCK11Q5JSL3 2073 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 C21orf140B9A014 251 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 IGKV1D-33P01593 117 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 IGKV1-33P01594 117 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 HNRNPA3P51991 378 aaKnown RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 YPEL3P61236 119 aaPredicted RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 FGF12P61328 243 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 ARL16Q0P5N6 197 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 MSMO1Q15800 293 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 MYPOPQ86VE0 399 aaPredicted RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 RNF24Q9Y225 148 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 UBE2J1Q9Y385 318 aaPredicted RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 F2Z2F3 143 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 MLNRO43193 412 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 MMP23AO75900 390 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 TNFSF15O95150 251 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 PPP1CBP62140 327 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 TESK1Q15569 626 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 FFAR4Q5NUL3 377 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 C20orf204Q6ZNR8 217 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 TBC1D26Q86UD7 250 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 MCEMP1Q8IX19 187 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
CCNL1-216ENST00000475298 Q8NFD4 153 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 LHX4Q969G2 390 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 RNF2Q99496 336 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 ELOVL5Q9NYP7 299 aa10.94□□□□□ -0.66
CCNL1-216ENST00000475298 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 TRAPPC2LH3BP13 241 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 SS18L1O75177 396 aaPredicted RBP10.93□□□□□ -0.66
CCNL1-216ENST00000475298 VENTXO95231 258 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 NAPSAO96009 420 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 SP1P08047 785 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 NPPCP23582 126 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 HINT1P49773 126 aaPredicted RBP10.93□□□□□ -0.66
CCNL1-216ENST00000475298 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 ZNF525Q8N782 197 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 OR5T1Q8NG75 326 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 SCGB1C1Q8TD33 95 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 LOXL4Q96JB6 756 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 TXN2Q99757 166 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
CCNL1-216ENST00000475298 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
CCNL1-216ENST00000475298 SH2D1BO14796 132 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 RAC2P15153 192 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 SERF2P84101 59 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 FOXL1Q12952 345 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 RNFT1Q5M7Z0 435 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 GAPTQ8N292 157 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 OR4F5Q8NH21 305 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 RDH5Q92781 318 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 OR4F4Q96R69 305 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 RPH3ALQ9UNE2 315 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 TRAV34A0A0B4J273 112 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 A0A1W2PR80 420 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 M0R296 226 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 HMGB3O15347 200 aaKnown RBP10.92□□□□□ -0.66
CCNL1-216ENST00000475298 RHBDL1O75783 438 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
CCNL1-216ENST00000475298 LDLRAD2Q5SZI1 272 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 TMPRSS7Q7RTY8 843 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 HAPLN4Q86UW8 402 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
CCNL1-216ENST00000475298 IGHV3-64DA0A0J9YX35 117 aa10.91□□□□□ -0.66
CCNL1-216ENST00000475298 SLC22A20A6NK97 555 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms