RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 PPP1CCP36873 323 aaKnown RBP4.37□□□□□ -1.71
HDAC3-206ENST00000471968 ATP6AP1Q15904 470 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 TNXAQ16473 311 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 MICAQ29983 383 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF829Q3KNS6 432 aaPredicted RBP4.37□□□□□ -1.71
HDAC3-206ENST00000471968 BCL2L15Q5TBC7 163 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 UBE2UQ5VVX9 321 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 NXNL2Q5VZ03 156 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 OR10K2Q6IF99 312 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 VTCN1Q7Z7D3 282 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF554Q86TJ5 538 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 FUNDC1Q8IVP5 155 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 ARHGAP24Q8N264 748 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 TTC9CQ8N5M4 171 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 SUMF2Q8NBJ7 301 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 FCGR1BQ92637 280 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 RHPN1-AS1Q9BWJ2 59 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 MED20Q9H944 212 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 SAR1AQ9NR31 198 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF581Q9P0T4 197 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 AP3M1Q9Y2T2 418 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 NEBP20929 6669 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 USH2AO75445 5202 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 IGKV1-9A0A0C4DH69 117 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 LOC102723971A0A1B0GUV8 181 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 CHEK1O14757 476 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 PSCAO43653 123 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 H1F0P07305 194 aaKnown RBP4.36□□□□□ -1.71
HDAC3-206ENST00000471968 CRYGBP07316 175 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 MRPL19P49406 292 aaKnown RBP4.36□□□□□ -1.71
HDAC3-206ENST00000471968 GZMMP51124 257 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 HCCSP53701 268 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 OR2B8PP59922 312 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 SELENOWP63302 87 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 CBX3Q13185 183 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 ODF4Q2M2E3 257 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 FAM71F2Q6NXP2 309 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 ERICH5Q6P6B1 374 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 ARPINQ7Z6K5 226 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 CROCCP3Q8IVE0 287 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 OTULINQ96BN8 352 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 CGREF1Q99674 301 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 MROQ9BYG7 248 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 TTTY10Q9BZA0 68 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 MS4A6AQ9H2W1 248 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 IFI27L2Q9H2X8 130 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 RHOFQ9HBH0 211 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 RAB9BQ9NP90 201 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 ABCD2Q9UBJ2 740 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 SMPXQ9UHP9 88 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 LAMP5Q9UJQ1 280 aa4.36□□□□□ -1.71
HDAC3-206ENST00000471968 IGHV3OR16-13A0A075B7E8 117 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 TRBV7-1A0A0A6YYK4 115 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 IGHV3-74A0A0B4J1X5 117 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 A0A1W2PRQ8 180 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 ST8SIA5O15466 376 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 NPPAP01160 153 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 MT-ND4P03905 459 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 NUTF2P61970 127 aaKnown RBP4.35□□□□□ -1.71
HDAC3-206ENST00000471968 DGCR6Q14129 220 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 RCN1Q15293 331 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 PIGYQ3MUY2 71 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 SYT6Q5T7P8 510 aaPredicted RBP4.35□□□□□ -1.71
HDAC3-206ENST00000471968 FAM90A2PQ658T7 463 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 Q6ZSR3 168 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 FKBP9P1Q75LS8 142 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 TCF24Q7RTU0 167 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 SPATA24Q86W54 205 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 ELMOD2Q8IZ81 293 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 OR2AK2Q8NG84 335 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 EDARADDQ8WWZ3 215 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 ACOT12Q8WYK0 555 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 GGHQ92820 318 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 SLC7A6OSQ96CW6 309 aaPredicted RBP4.35□□□□□ -1.71
HDAC3-206ENST00000471968 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 GNPNAT1Q96EK6 184 aaPredicted RBP4.35□□□□□ -1.71
HDAC3-206ENST00000471968 FANCD2OSQ96PS1 177 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 EFCAB1Q9HAE3 211 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 MSRB1Q9NZV6 116 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 PIPOXQ9P0Z9 390 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 TRAPPC2LQ9UL33 140 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF257Q9Y2Q1 563 aa4.35□□□□□ -1.71
HDAC3-206ENST00000471968 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 PRR32B1ATL7 298 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 K7EMT4 169 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 RAB29O14966 203 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 ARPC2O15144 300 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 SYT7O43581 403 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 ATP5G1P05496 136 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 HNRNPCP07910 306 aaKnown RBP eCLIP4.34□□□□□ -1.71
HDAC3-206ENST00000471968 OCM2P0CE71 109 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 OCMP0CE72 109 aaPredicted RBP4.34□□□□□ -1.71
HDAC3-206ENST00000471968 ALOX5APP20292 161 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 PRKACBP22694 351 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 FGF9P31371 208 aaPredicted RBP4.34□□□□□ -1.71
HDAC3-206ENST00000471968 KDELR2P33947 212 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 ATP5G3P48201 142 aa4.34□□□□□ -1.71
HDAC3-206ENST00000471968 SOX2P48431 317 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms