RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ADAM30Q9UKF2 790 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 WSB1Q9Y6I7 421 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 NUDT19A8MXV4 375 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 H3BMQ9 156 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 FCN1O00602 326 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 FCGR3BO75015 233 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ELANEP08246 267 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 NAT1P18440 290 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 PSMB8P28062 276 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 PPIFP30405 207 aaKnown RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 FXYD4P59646 89 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 HERV-K104P61576 105 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 RPL30P62888 115 aaKnown RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 CX3CL1P78423 397 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 EIF4EBP1Q13541 118 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 MSMO1Q15800 293 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 C19orf54Q5BKX5 351 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ZNF660Q6AZW8 331 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 C8orf86Q6ZUL3 223 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 PPP1R27Q86WC6 154 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 LAX1Q8IWV1 398 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 OR5H2Q8NGV7 314 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 OSR1Q8TAX0 266 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 DYNC2LI1Q8TCX1 351 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 TCTEX1D2Q8WW35 142 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ARPC1AQ92747 370 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ISOC1Q96CN7 298 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 HSD17B10Q99714 261 aaKnown RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 FAM103A1Q9BTL3 118 aaKnown RBP10.1□□□□□ -0.79
COL5A1-206ENST00000465877 FXYD6Q9H0Q3 95 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 ZFP57Q9NU63 452 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 SCOCQ9UIL1 159 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 A3GALT2U3KPV4 340 aa10.1□□□□□ -0.79
COL5A1-206ENST00000465877 A0A1W2PN81 502 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 SLC6A1P30531 599 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 RCVRNP35243 200 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 HRH1P35367 487 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 CHRNA7P36544 502 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 LGALS7P47929 136 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 SSBP2P81877 361 aaPredicted RBP10.09□□□□□ -0.79
COL5A1-206ENST00000465877 DYRK1AQ13627 763 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
COL5A1-206ENST00000465877 TCTEX1D1Q8N7M0 179 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 GPHA2Q96T91 129 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 SLC5A7Q9GZV3 580 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 MIXL1Q9H2W2 232 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 CCL28Q9NRJ3 127 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 PRELID3BQ9Y3B1 194 aa10.09□□□□□ -0.79
COL5A1-206ENST00000465877 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
COL5A1-206ENST00000465877 G3V4G9 280 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 SULT1C2O00338 296 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 RGS5O15539 181 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 TNFSF12O43508 249 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 PMP2P02689 132 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 CRYGBP07316 175 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 SAA1P0DJI8 122 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-206ENST00000465877 CD33P20138 364 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 RFX2P48378 723 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 UBE2KP61086 200 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 GNB1P62873 340 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 VMA21Q3ZAQ7 101 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF66Q6ZN08 573 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 IDO2Q6ZQW0 420 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF818PQ6ZRF7 136 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 C1QL4Q86Z23 238 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF695Q8IW36 515 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 GRPEL2Q8TAA5 225 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 MYOZ3Q8TDC0 251 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 GIMAP1Q8WWP7 306 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 MOB3AQ96BX8 217 aa10.08□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF2Q9BSG1 426 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-206ENST00000465877 FOXA2Q9Y261 457 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-206ENST00000465877 TNCP24821 2201 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 ARPC1BO15143 372 aaKnown RBP10.07□□□□□ -0.8
COL5A1-206ENST00000465877 SOX15O60248 233 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-206ENST00000465877 HLA-DMAP28067 261 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 PJVKQ0ZLH3 352 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 CATR1Q13166 79 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 MFSD4AQ8N468 514 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 MINDY2Q8NBR6 621 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 ZBTB34Q8NCN2 500 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 DCUN1D5Q9BTE7 237 aa10.07□□□□□ -0.8
COL5A1-206ENST00000465877 CREBL2O60519 120 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-206ENST00000465877 CNIH1O95406 144 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 CDX1P47902 265 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-206ENST00000465877 TMEM267Q0VDI3 215 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-206ENST00000465877 FXYD3Q14802 87 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 MRGPRG-AS1Q2M3A8 158 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 ACTBL2Q562R1 376 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms