RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 IL7P13232 177 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 NFYAP23511 347 aaPredicted RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 DUTP33316 252 aaKnown RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 F2RL1P55085 397 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 SLC35B1P78383 322 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 MRPS10P82664 201 aaKnown RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 SRSF4Q08170 494 aaKnown RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 ACTBL2Q562R1 376 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 GLDNQ6ZMI3 551 aaPredicted RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 OVCH2Q7RTZ1 564 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 C5orf30Q96GV9 206 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
VPS52-213ENST00000461743 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
VPS52-213ENST00000461743 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
VPS52-213ENST00000461743 RRHO14718 337 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 IGF1P05019 195 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 PTHLHP12272 177 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 LGALS7P47929 136 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 DYRK1AQ13627 763 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 TMEM177Q53S58 311 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 CENPVQ7Z7K6 275 aaPredicted RBP9.37□□□□□ -0.91
VPS52-213ENST00000461743 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 STPG2Q8N412 459 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 OR5AU1Q8NGC0 362 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 GIMAP1Q8WWP7 306 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 DDB2Q92466 427 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
VPS52-213ENST00000461743 HSD17B10Q99714 261 aaKnown RBP9.37□□□□□ -0.91
VPS52-213ENST00000461743 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 EXTL2Q9UBQ6 330 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 MRPS7Q9Y2R9 242 aaKnown RBP9.37□□□□□ -0.91
VPS52-213ENST00000461743 PRELID3BQ9Y3B1 194 aa9.37□□□□□ -0.91
VPS52-213ENST00000461743 IGKV1D-13A0A0B4J2D9 117 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 MEIS3P1A6NDR6 274 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 RGS5O15539 181 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 CSF1P09603 554 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 IGKV1-13P0DP09 117 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 CD28P10747 220 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 TBPP20226 339 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 SLC6A1P30531 599 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 FCGR2CP31995 323 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 KIR2DS2P43631 304 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
VPS52-213ENST00000461743 HERV-K104P61576 105 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 CD83Q01151 205 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 SSBP1Q04837 148 aaKnown RBP9.36□□□□□ -0.91
VPS52-213ENST00000461743 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 ZNF66Q6ZN08 573 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 ZNF767PQ75MW2 155 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 TCTE3Q8IZS6 198 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 TCTEX1D1Q8N7M0 179 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
VPS52-213ENST00000461743 ZFAND1Q8TCF1 268 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
VPS52-213ENST00000461743 HSPB9Q9BQS6 159 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 TBC1D24Q9ULP9 559 aa9.36□□□□□ -0.91
VPS52-213ENST00000461743 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
VPS52-213ENST00000461743 LINC00473A8K010 186 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 VDAC1P21796 283 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 AADACP22760 399 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 CNTFRP26992 372 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 AP2S1P53680 142 aaPredicted RBP9.35□□□□□ -0.91
VPS52-213ENST00000461743 EIF4EBP1Q13541 118 aaPredicted RBP9.35□□□□□ -0.91
VPS52-213ENST00000461743 PLGLAQ15195 96 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 PSG5Q15238 335 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
VPS52-213ENST00000461743 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 DHRS11Q6UWP2 260 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 LAX1Q8IWV1 398 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 OR4F17Q8NGA8 305 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 MOB3AQ96BX8 217 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 OR4F4Q96R69 305 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 MIXL1Q9H2W2 232 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 OR51J1Q9H342 316 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
VPS52-213ENST00000461743 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 GABARAPH6UMI1 98 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 CTDSPLO15194 276 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 SHOXO15266 292 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
VPS52-213ENST00000461743 ELANEP08246 267 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 HLA-DMAP28067 261 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 HRH1P35367 487 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 RPS16P62249 146 aaKnown RBP9.34□□□□□ -0.91
VPS52-213ENST00000461743 CFHR3Q02985 330 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 CATR1Q13166 79 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 FOXE3Q13461 319 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 ASAH1Q13510 395 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 VAX1Q5SQQ9 334 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms