RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 SLC25A17O43808 307 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 ELK1P19419 428 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 FCGR2CP31995 323 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 RUNX1Q01196 453 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 PDLIM3Q53GG5 364 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 TMEM69Q5SWH9 247 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 ZNF491Q8N8L2 437 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 PARP11Q9NR21 331 aa12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-205ENST00000452128 I3L521 148 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 HPGDSO60760 199 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 CA2P00918 260 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 PF4V1P10720 104 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 IGLL1P15814 213 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 RAB9AP51151 201 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 UBE2KP61086 200 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 FHL3Q13643 280 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 TEX45Q8NA69 505 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
SCAMP4-205ENST00000452128 MEIS3P1A6NDR6 274 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 CCL24O00175 119 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 PPYP01298 95 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 FCER2P06734 321 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 PRSS3P35030 304 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 DYRK1AQ13627 763 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 SPCS2Q15005 226 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 CDK10Q15131 360 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 RTL8BQ17RB0 113 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 GPR141Q7Z602 305 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 MFSD4AQ8N468 514 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 TCTEX1D1Q8N7M0 179 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 OSR1Q8TAX0 266 aaPredicted RBP12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 C4orf3Q8WVX3 66 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 HARBI1Q96MB7 349 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.41
SCAMP4-205ENST00000452128 BRI3O95415 125 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 CRYZL1O95825 349 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 RFX2P48378 723 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 ARPC4P59998 168 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 FXYD3Q14802 87 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 PRSS8Q16651 343 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 LFNGQ8NES3 379 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 GPHA2Q96T91 129 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 ADAM30Q9UKF2 790 aa12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-205ENST00000452128 SHOXO15266 292 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 TPPPO94811 219 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 PF4P02776 101 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 CD33P20138 364 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 GNRHRP30968 328 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 RPL5P46777 297 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 PLGLAQ15195 96 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 ZBTB34Q8NCN2 500 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 RCC1LQ96I51 464 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 DUX3Q96PT4 197 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 SCPEP1Q9HB40 452 aa12.5□□□□□ -0.41
SCAMP4-205ENST00000452128 SULT1C2O00338 296 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 FCGR3BO75015 233 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 IL6RP08887 468 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 TMBIM6P55061 237 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 TMEM267Q0VDI3 215 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 KCTD9Q7L273 389 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 DYNC2LI1Q8TCX1 351 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 ARPC1AQ92747 370 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 VSIG4Q9Y279 399 aa12.49□□□□□ -0.41
SCAMP4-205ENST00000452128 A0A1W2PN81 502 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 NUDT19A8MXV4 375 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 PMP2P02689 132 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 CHRNA7P36544 502 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 EGFEM1PQ0D2K5 195 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 ACTBL2Q562R1 376 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 MZT2AQ6P582 158 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 ZNF818PQ6ZRF7 136 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 OR5M8Q8NGP6 311 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 CASTOR1Q8WTX7 329 aa12.48□□□□□ -0.41
SCAMP4-205ENST00000452128 SECTM1Q8WVN6 248 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms