RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 BTBD17A6NE02 478 aa16.08■□□□□ 0.16
FAM3A-215ENST00000447601 CEBPZOSA8MTT3 80 aa16.08■□□□□ 0.16
FAM3A-215ENST00000447601 PPIHO43447 177 aaKnown RBP16.08■□□□□ 0.16
FAM3A-215ENST00000447601 MRPS11P82912 194 aaKnown RBP16.08■□□□□ 0.16
FAM3A-215ENST00000447601 GUK1Q16774 197 aa16.08■□□□□ 0.16
FAM3A-215ENST00000447601 UTF1Q5T230 341 aa16.08■□□□□ 0.16
FAM3A-215ENST00000447601 LYG1Q8N1E2 194 aa16.08■□□□□ 0.16
FAM3A-215ENST00000447601 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 NDUFB3O43676 98 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 ZG16O60844 167 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 TLE4Q04727 773 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 GUCA2BQ16661 112 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 LRRC75BQ2VPJ9 315 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 PUSL1Q8N0Z8 303 aaKnown RBP16.07■□□□□ 0.16
FAM3A-215ENST00000447601 OR4C12Q96R67 309 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 PSMG3Q9BT73 122 aaPredicted RBP16.07■□□□□ 0.16
FAM3A-215ENST00000447601 CISD1Q9NZ45 108 aaKnown RBP16.07■□□□□ 0.16
FAM3A-215ENST00000447601 FBXO7Q9Y3I1 522 aa16.07■□□□□ 0.16
FAM3A-215ENST00000447601 MED19A0JLT2 244 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 FAM157AC9JC47 383 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 TNFRSF13BO14836 293 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 SCAF4O95104 1147 aaKnown RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 SNAPINO95295 136 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 H2AFB1P0C5Y9 115 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 OR9G9P0C7N8 305 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 C1QTNF9P0C862 333 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 SFTPCP11686 197 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 GNG10P50151 68 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 ADORA2A-AS1P86434 159 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 ATP6V1FQ16864 119 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 LRRC10Q5BKY1 277 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 OR8G2PQ6IF36 304 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 SLC25A48Q6ZT89 311 aaKnown RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 OR4A16Q8NH70 328 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 ZDHHC16Q969W1 377 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 ZNF251Q9BRH9 671 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 QTRT1Q9BXR0 403 aaKnown RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 EIF5A2Q9GZV4 153 aaKnown RBP16.06■□□□□ 0.16
FAM3A-215ENST00000447601 IGF2RP11717 2491 aa16.06■□□□□ 0.16
FAM3A-215ENST00000447601 IGHV1-69-2A0A0G2JMI3 117 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 A0A1B0GW64 132 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 MMP23AO75900 390 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 DAOP14920 347 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 ZNF273Q14593 569 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 C1orf229Q6ZS94 237 aaPredicted RBP16.05■□□□□ 0.16
FAM3A-215ENST00000447601 PINX1Q96BK5 328 aaKnown RBP16.05■□□□□ 0.16
FAM3A-215ENST00000447601 ZNF714Q96N38 554 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 WDR61Q9GZS3 305 aaKnown RBP16.05■□□□□ 0.16
FAM3A-215ENST00000447601 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 CACNA1DQ01668 2161 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 C9JQL5 133 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 NDUFA2O43678 99 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 IFNA17P01571 189 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 GRNP28799 593 aaKnown RBP16.05■□□□□ 0.16
FAM3A-215ENST00000447601 OR2B8PP59922 312 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 SSX9Q7RTT3 188 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 OR10P1Q8NGE3 313 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 OR52E5Q8NH55 327 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 CA5BP1Q8WTZ4 195 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 KAAG1Q9UBP8 84 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 KPTNQ9Y664 436 aa16.05■□□□□ 0.16
FAM3A-215ENST00000447601 DYSFO75923 2080 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 PLAUP00749 431 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 HBE1P02100 147 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 SPCS3P61009 180 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 RAB2AP61019 212 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 SERF2P84101 59 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 HEPN1Q6WQI6 88 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 CLCC1Q96S66 551 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 RSG1Q9BU20 258 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 TMEM147Q9BVK8 224 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 SCRT1Q9BWW7 348 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 TMEM140Q9NV12 185 aa16.04■□□□□ 0.16
FAM3A-215ENST00000447601 DNASE2O00115 360 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 DSCAMO60469 2012 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 PPT1P50897 306 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 PDLIM3Q53GG5 364 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 TMEM200BQ69YZ2 307 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 MUC15Q8N387 334 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 ZNF383Q8NA42 475 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 H1FXQ92522 213 aaKnown RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 TAF15Q92804 592 aaKnown RBP eCLIP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 RAB39BQ96DA2 213 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 SMDT1Q9H4I9 107 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 UBE2L5PA0A1B0GUS4 154 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 A0A1B0GV50 99 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 GPR37O15354 613 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 RPP30P78346 268 aaKnown RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 HFEQ30201 348 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 ZNF672Q499Z4 452 aaPredicted RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 SPSB3Q6PJ21 355 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 LYPD2Q6UXB3 125 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 ZCCHC14Q8WYQ9 949 aaKnown RBP16.03■□□□□ 0.16
FAM3A-215ENST00000447601 KIAA1456Q9P272 454 aa16.03■□□□□ 0.16
FAM3A-215ENST00000447601 RAI1Q7Z5J4 1906 aaPredicted RBP16.02■□□□□ 0.16
FAM3A-215ENST00000447601 PMS2P5A8MQ11 134 aa16.02■□□□□ 0.16
FAM3A-215ENST00000447601 TSPAN4O14817 238 aa16.02■□□□□ 0.16
FAM3A-215ENST00000447601 FCN3O75636 299 aa16.02■□□□□ 0.16
FAM3A-215ENST00000447601 RELBQ01201 579 aa16.02■□□□□ 0.16
FAM3A-215ENST00000447601 SPINK9Q5DT21 86 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms